Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq2801840 147 6e-33 seq371971 140 9e-31 seq2459808 123 7e-26 seq3152938 98.7 3e-18 seq2704621 93.3 1e-16 >seq2801840 Length=134 Score = 147 bits (162), Expect = 6e-33 Identities = 113/134 (84%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 300 TGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGC 359 ||||| ||||||||| |||| | |||||||||| |||||||||| | |||||||||||| Sbjct 134 TGGGCGCAAGCCTGATCCAGCCATGCCGCGTGAGTGATGAAGGCCCTAGGGTCGTAAAGC 75 Query 360 TCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCC 419 ||| || || ||| ||||||||| |||| || | ||| |||||||||||| |||||| Sbjct 74 TCTTTCGCCAGGGATGATAATGACAGTACCTGGTAAAGAAACCCCGGCTAACTCCGTGCC 15 Query 420 AGCAGCCGCGGTAA 433 |||||||||||||| Sbjct 14 AGCAGCCGCGGTAA 1 >seq371971 Length=1724 Score = 140 bits (154), Expect = 9e-31 Identities = 119/146 (82%), Gaps = 3/146 (2%) Strand=Plus/Minus Query 260 CAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAG 319 || |||||||||||||||||||||||||||| || | |||||||| |||||||| | || Sbjct 802 CAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGCAAGCCTGACGGAG 743 Query 320 CAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAG---A 376 ||| ||||||| | || |||||| | |||| ||||| | || | |||||||||| | Sbjct 742 CAAGACCGCGTGGGGGAGGAAGGCTCTTGGGTTGTAAACCCCTTTTCTCAAGGAAGAACA 683 Query 377 TAATGACGGTACTTGAGGAGGAAGCC 402 |||||||||||||||||| ||||| Sbjct 682 CAATGACGGTACTTGAGGAATAAGCC 657 Score = 100 bits (110), Expect = 8e-19 Identities = 77/90 (86%), Gaps = 1/90 (1%) Strand=Plus/Minus Query 411 CTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGC 470 || |||||||||||||||||||||||| ||| ||| ||||||||||||||| | | |||| Sbjct 591 CTCCGTGCCAGCAGCCGCGGTAATACGGAGGAGGCAAGCGTTATCCGGAATGA-TTGGGC 533 Query 471 GTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 |||||| || ||||||||| | | ||||| Sbjct 532 GTAAAGCGTCCGTAGGTGGCTGTTCAAGTC 503 >seq2459808 Length=122 Score = 123 bits (136), Expect = 7e-26 Identities = 82/91 (90%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 275 GGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGC 334 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct 122 GGCAGCAGTGGGGAATATTGCACAATGGGCGGAAGCCTGATGCAGCAACGCCGCGTGCGG 63 Query 335 GATGAAGGCCTTCGGGTCGTAAAGCTCTGTC 365 ||||| ||||||||||| ||||| | || || Sbjct 62 GATGACGGCCTTCGGGTTGTAAACCGCTTTC 32 >seq3152938 Length=155 Score = 98.7 bits (108), Expect = 3e-18 Identities = 70/79 (89%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 414 CGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTA 473 |||||||||||||||||||||||| |||||| ||||||| | |||||||||| ||||||| Sbjct 153 CGTGCCAGCAGCCGCGGTAATACGGAGGGGGTTAGCGTTGTTCGGAATTACT-GGGCGTA 95 Query 474 AAGGGTGCGTAGGTGGTTT 492 ||| || |||||| || || Sbjct 94 AAGCGTACGTAGGCGGATT 76 >seq2704621 Length=130 Score = 93.3 bits (102), Expect = 1e-16 Identities = 91/116 (78%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 243 GGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGG 302 || |||||||||||| ||| |||||||||||||||||||||| ||||||||| |||||| Sbjct 130 GGTACTGAGACACGGACCAGACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGG 71 Query 303 GCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA-AGGCCTTCGGGTCGTAAA 357 || |||| |||| | |||||||| ||||| | ||| |||| ||||| Sbjct 70 AGGCAACTCTGAACCAGCCATGCCGCGTGTAGGATGACTGCCCTATGGGTTGTAAA 15 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1438171008768