Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq371971 306 9e-81 seq2967281 172 1e-40 seq253078 172 1e-40 seq3152938 129 1e-27 seq3187288 118 2e-24 seq1172817 113 1e-22 seq2289621 104 5e-20 seq253077 89.7 1e-15 seq1064126 87.8 4e-15 >seq371971 Length=1724 Score = 306 bits (338), Expect = 9e-81 Identities = 300/386 (78%), Gaps = 6/386 (2%) Strand=Plus/Minus Query 26 CTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGCG 85 || |||||||||||||||||||||||| ||| ||| ||||||||||||||| | |||||| Sbjct 591 CTCCGTGCCAGCAGCCGCGGTAATACGGAGGAGGCAAGCGTTATCCGGAATGATTGGGCG 532 Query 86 TAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGGGA 145 ||||| || ||||||||| | | ||||| | || |||| | ||||| ||| | | | Sbjct 531 TAAAGCGTCCGTAGGTGGCTGTTCAAGTCTGCTGTCAAAGACAGTGGCTTAACTACTGAA 472 Query 146 CTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAGCG 205 || | ||||||| | |||||||| | | ||||||| |||||||| |||||||| Sbjct 471 AGGCAGTGGAAACTGAACAGCTAGAGTACGGTAGGGGCAGAGGGAATTCCCGGTGTAGCG 412 Query 206 GTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAAC 265 ||||||||||||||||| ||| ||||||| |||||||| ||| |||||| | ||||| Sbjct 411 GTGAAATGCGTAGATATCGGGAAGAACACCGGTGGCGAAAGCGCTCTGCTGGGCCGTAAC 352 Query 266 TGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGC 325 ||||||||||| ||||||| ||||||| || ||||||||||||| ||||||| || Sbjct 351 TGACACTGAGGGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCCCAGTAGTCCTAGC 292 Query 326 CGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTC---CGGTGCCGCAGCAAAC 382 ||||||||||| | ||||||||| || || | | | |||||| ||| ||| Sbjct 291 CGTAAACGATGGAAACTAGGTGT---AGCCTGTATCGACCCGGGCTGTGCCGAAGCTAAC 235 Query 383 GCAATAAGTATTCCACCTGGGGAGTA 408 || ||||| | || ||||||||||| Sbjct 234 GCGTTAAGTTTCCCGCCTGGGGAGTA 209 >seq2967281 Length=143 Score = 172 bits (190), Expect = 1e-40 Identities = 122/140 (87%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 177 GAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCA 236 ||| || ||||||||||| ||||||| |||||||| |||||||||| |||||||||||| Sbjct 140 GAGAGGTGAGTGGAATTCCGAGTGTAGAGGTGAAATTCGTAGATATTCGGAGGAACACCA 81 Query 237 GTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAA 296 ||||||||||||||| |||| | |||||| |||||| |||||| ||||||||||| Sbjct 80 GTGGCGAAGGCGGCTCACTGGCTCGATACTGACGCTGAGGTACGAAAGTGTGGGGAGCAA 21 Query 297 ACAGGATTAGATACCCTGGT 316 |||||||||||||||||||| Sbjct 20 ACAGGATTAGATACCCTGGT 1 >seq253078 Length=721 Score = 172 bits (190), Expect = 1e-40 Identities = 209/297 (70%), Gaps = 42/297 (14%) Strand=Plus/Plus Query 62 AGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTG 121 ||||||| |||||||||||||||||||| | ||||||| || || | ||||||| ||| Sbjct 220 AGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTAGGCGGATTTGTCAGTCAGATGTG 279 Query 122 AAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGG 181 |||| | ||||||||| || | ||| ||||| ||||| | ||||||| | || | Sbjct 280 AAAGCCCTGGGCTCAACCTAGGAATTGCATTTGATACTGCGAGTCTAGAGTATGGTAGAG 339 Query 182 GCAAGTGGAATTCCTAGTGTAGCGGTGAAATGC--------------------------- 214 | ||||||||||| ||||||||||||||||| Sbjct 340 GTGAGTGGAATTCCAGGTGTAGCGGTGAAATGCNNNNNNNNNNNNNNNNNNNNNNNNNNN 399 Query 215 ---------------GTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGAC 259 |||||||| ||||||||| |||||||||||||| || ||||| Sbjct 400 NNNNNNNNNNNNNNNGTAGATATCTGGAGGAACATCAGTGGCGAAGGCGACTCACTGGAT 459 Query 260 TGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGT 316 |||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct 460 CAATACTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGT 516 >seq3152938 Length=155 Score = 129 bits (142), Expect = 1e-27 Identities = 115/144 (80%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 29 CGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGCGTAA 88 |||||||||||||||||||||||| |||||| ||||||| | |||||||||||||||||| Sbjct 153 CGTGCCAGCAGCCGCGGTAATACGGAGGGGGTTAGCGTTGTTCGGAATTACTGGGCGTAA 94 Query 89 AGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGGGACTG 148 || || |||||| || || |||| | ||||||| | | |||||||||| || |||| Sbjct 93 AGCGTACGTAGGCGGATTGGAAAGTTGGGGGTGAAATCCCAGGGCTCAACCCTGGAACTG 34 Query 149 CTTTTGAAACTGCAGGGCTAGAGT 172 | | ||||| | ||||||| Sbjct 33 CCTCCAAAACTATCAGTCTAGAGT 10 >seq3187288 Length=158 Score = 118 bits (130), Expect = 2e-24 Identities = 97/117 (83%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 292 AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGG 351 ||||||||||||||||||||||||||||||| ||||||||||||| |||||| || || Sbjct 1 AGCAAACAGGATTAGATACCCTGGTAGTCCATGCCGTAAACGATGTCTACTAGCCGTTGG 60 Query 352 GGCGCATAAGTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 ||| | || ||| ||| |||||| ||||| ||||||| || ||||||||||| Sbjct 61 GGCCTTTGAG-GCTTTAGTGGCGCAGCTAACGCGATAAGTAGACCGCCTGGGGAGTA 116 >seq1172817 Length=100 Score = 113 bits (124), Expect = 1e-22 Identities = 85/100 (85%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 237 GTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAA 296 ||||||||||||| | |||| | | ||||| |||||| |||||||||||||||| | Sbjct 100 GTGGCGAAGGCGGTTCTCTGGGCCTTTCCTGACGCTGAGGAGCGAAAGCGTGGGGAGCGA 41 Query 297 ACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATG 336 ||||| ||||||||||||||||||||||| ||||||| || Sbjct 40 ACAGGCTTAGATACCCTGGTAGTCCACGCTGTAAACGGTG 1 >seq2289621 Length=118 Score = 104 bits (114), Expect = 5e-20 Identities = 97/120 (81%), Gaps = 4/120 (3%) Strand=Plus/Plus Query 209 AAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGAC-TGTA-ACT 266 |||||| ||||||||| ||| ||| | |||||||| || | || || | || ||| Sbjct 1 AAATGCTTAGATATTACACAGAATACCGATTGCGAAGGCAGCCTACT--ACGTATATACT 58 Query 267 GACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCC 326 ||| || | | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 59 GACGCTCATGGACGAAAGCGTGGGGAGCGAACAGGATTAGATACCCTGGTAGTCCACGCC 118 >seq253077 Length=378 Score = 89.7 bits (98), Expect = 1e-15 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 62 AGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTG 121 ||||||| |||||||||||||||||||| || || ||| ||||| ||||| ||| ||| Sbjct 251 AGCGTTAATCGGAATTACTGGGCGTAAAGCGTACGCAGGCGGTTTGTTAAGCGAGATGTG 310 Query 122 AAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTG 173 |||| | ||||||||| || ||||| ||| ||||| |||||||| Sbjct 311 AAAGCCCCGGGCTCAACCTGGGAACTGCATTTCGAACTGGCAAACTAGAGTG 362 >seq1064126 Length=100 Score = 87.8 bits (96), Expect = 4e-15 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 151 TTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAA 210 || ||||||| | || |||||||| || || |||||||||||| ||||||||||||| Sbjct 15 TTGGAAACTGGAAAACTTGAGTGCAGAAGAGGAAAGTGGAATTCCATGTGTAGCGGTGAA 74 Query 211 ATGCGTAGATATTAGGAGGAACACCA 236 ||||| ||| || |||||||||||| Sbjct 75 ATGCGCAGAGATATGGAGGAACACCA 100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1155453630976