Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq3667356 156 8e-36 seq3356550 147 4e-33 seq2390934 131 3e-28 >seq3667356 Length=242 Score = 156 bits (172), Expect = 8e-36 Identities = 127/152 (84%), Gaps = 4/152 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||||| | || | | || | ||||||| | |||||||||||||||||| Sbjct 151 CTTCTTAGAGGGACTTTTGGTGACTAACCAAAGGAAGTTGGGGGCAATAACAGGTCTGTG 92 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| ||||||||||||||||||||| ||| | | |||||||| || Sbjct 91 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACAATGATACACGCAACGAGT---CCA 35 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222 ||||| ||| |||||| |||||||||||| || Sbjct 34 CCTTGTCCGAAAGGTCCGGGTAATCTTGTAAA 3 >seq3356550 Length=175 Score = 147 bits (162), Expect = 4e-33 Identities = 122/145 (84%), Gaps = 3/145 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||||| ||| | |||| | | || ||||| |||||||||||||||| Sbjct 21 CTTCTTAGAGGGACTAGTGGCGTTTAGCC-ACGCGAGATTGAG-CAATAACAGGTCTGTG 78 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||| ||||||||||||||||||||||| || || || || | Sbjct 79 ATGCCCTTAGATGTTCGGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGTGTGTCTGC 138 Query 191 CCTTGGCCGGAAGGTCTGGGTAATC 215 ||||||||||||||||||||||||| Sbjct 139 CCTTGGCCGGAAGGTCTGGGTAATC 163 >seq2390934 Length=120 Score = 131 bits (144), Expect = 3e-28 Identities = 92/105 (88%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 224 CTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTA 283 |||| ||||| | ||||||| | |||| ||||||| | ||| |||||||||| || |||| Sbjct 1 CTCTTTCGTGATTGGGATAGGGAATTGTAATTATTTCCCTTGAACGAGGAATTCCCAGTA 60 Query 284 AGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 61 AGCGCGAGTCATCAGCTCGCGTTGATTACGTCCCTGCCCTTTGTA 105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 909612432896