Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq3350029 187 8e-45 seq3731440 185 3e-44 seq528855 185 3e-44 seq793819 183 1e-43 seq2558221 136 1e-29 seq446766 113 1e-22 seq2568161 109 2e-21 seq698051 75.2 4e-11 >seq3350029 Length=174 Score = 187 bits (206), Expect = 8e-45 Identities = 136/158 (86%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 107 GGCAACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAA 166 ||| ||||||||||| |||||||||| |||||||||||| | || ||||| || ||| Sbjct 7 GGCGACCGCCCCAGTCAAACTACCCATCAGGCACTGTCCTTGAACCGGATCACGGTCCAC 66 Query 167 GGTTAGATATCCACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGT 226 || ||||| ||| || |||||||||||||||| |||||||||||| ||||||||||| Sbjct 67 AGTGAGATAACCAGAACAATCAGAGTGGTATTTCACCAACGACTCCACCACCACTAGCGT 126 Query 227 GGCCGCATCATAGTCTCCCACCTATCCTACACAAACCG 264 |||||||||| |||||||||||||||||||||||||| Sbjct 127 GGCCGCATCAACGTCTCCCACCTATCCTACACAAACCG 164 >seq3731440 Length=270 Score = 185 bits (204), Expect = 3e-44 Identities = 212/283 (75%), Gaps = 14/283 (5%) Strand=Plus/Plus Query 78 CTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCACCAGG 137 |||| | ||||||||||| ||| ||||| | ||| ||||||| ||||||||||||| | Sbjct 1 CTTTAGAAGCCTCCGTTACTCTTTTGGAGG-CGACCACCCCAGTCAAACTACCCACCACG 59 Query 138 CACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACGGTCAGAGTGGTAT 197 |||||| | || | | || || | |||||| || || ||||||| Sbjct 60 CACTGTTCTCATCACTGAGTTAGGCTC-----TAGATAAGCAA-------AGGGTGGTAT 107 Query 198 TTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCCCACCTATCCTACA 257 ||||| || |||||||||| |||||| ||||| |||||||||||||||||||||||| Sbjct 108 TTCAAGGACAACTCCACAACGCCTAGCGACGCCGCTTCATAGTCTCCCACCTATCCTACA 167 Query 258 CAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGG-TCCCGGGGTCTTTTCGTCCT 316 || | | | || | |||||| |||||||||| |||| || |||||||||||||||| Sbjct 168 CATTACTTATCCAAAGTCAATACGAAGCTATAGTAAAGGTTCACGGGGTCTTTTCGTCCC 227 Query 317 GCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 || ||| | || ||||||| || |||| ||||||||||| Sbjct 228 GCTGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACCG 270 >seq528855 Length=1053 Score = 185 bits (204), Expect = 3e-44 Identities = 125/140 (89%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 285 CTATAGTGAAGGTCCCGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGT 344 ||||||| ||||||||||||||||| |||||||| ||||| ||||||||||||||||||| Sbjct 3 CTATAGTAAAGGTCCCGGGGTCTTTCCGTCCTGCTGCGCGTAACGAGCATCTTTACTCGT 62 Query 345 ACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCA 404 | ||||||||||||| | |||| ||||||| |||| | ||||||| ||||||||||| Sbjct 63 AATGCAATTTCACCGAGTTCATGGTGGAGACAGTAGGGAAATCGTTACTCCATTCGTGCA 122 Query 405 GGTCGGAACTTACCCGACAA 424 |||||||||||||||||||| Sbjct 123 GGTCGGAACTTACCCGACAA 142 Score = 109 bits (120), Expect = 2e-21 Identities = 95/120 (79%), Gaps = 10/120 (8%) Strand=Plus/Plus Query 445 TGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTG 504 |||||||||||||||||||||||||||||||||| | || |||| | || || Sbjct 246 TGGTTATAGTTACCACCGCCGTTTACTGGGGCTTAAGTTCACCGCTACGCATACA----- 300 Query 505 GTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACCTCG 564 ||||| ||| |||||||||||||||||||||||| |||||||||||||| ||| Sbjct 301 -----CTCACAGTTCCCCTTAACCTTCCAGCACCGGGCAGGAGTCAGTCCGTATACATCG 355 >seq793819 Length=3153 Score = 183 bits (202), Expect = 1e-43 Identities = 296/412 (72%), Gaps = 18/412 (4%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 |||||||||| |||| |||||||||||||||| ||| || ||||| | |||||| || Sbjct 2953 TCGACTTGTAGGTCTTGCAGTCAAGCTCCCTTATGCCTTTGCACTCTACGGCTGATTTCC 2894 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 |||||| ||||||||||| ||| ||||||||||||| ||| ||| ||| |||||||||| Sbjct 2893 AACCAGCCTGAGGGAACCCTTGCGCGCCTCCGTTACCATTTAGGA-GGCGACCGCCCCAG 2835 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCA- 179 | ||||| ||| || | |||||| | ||| ||| | ||| ||||||||| || | Sbjct 2834 TCAAACTGCCCCCCTGAAACTGTCTCTTTCCCGGATAACGGGAAAAGGTTAGAATTCTAG 2775 Query 180 CTACGGTCAGAGTGGTATTTCAACAACGACTCCACAA----CCACTAGCGTGGCCGCATC 235 || | | ||||||||||| ||| | | | || || || |||| || | | || Sbjct 2774 CTTC-GCCAGAGTGGTATCTCACCGATGGCT-CAGAATCCCCCACAAG---GAATTCTTC 2720 Query 236 ATAGTCTCCCACCTATCCTACACAAAC--CGCACCGAATGCCAATACCAAGCTATAGTGA 293 | || |||||||||||||| | ||| | || ||||| ||||| ||| |||| ||| | Sbjct 2719 ACAGCCTCCCACCTATCCTGCGCAAGCGAAGC-CCGAA-CCCAATTCCAGGCTACAGTAA 2662 Query 294 AG-GTCCCGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAAT 352 || || |||||||| |||| | || | | | ||||| || | | | || Sbjct 2661 AGCTTCATAGGGTCTTTCTGTCCGGGTGCAGGTAGTCCGTATCTTCACAGACAATTCTAT 2602 Query 353 TTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGC 403 ||| ||| | || | |||||||| | || |||||||||| ||||||| Sbjct 2601 TTCGCCGAGTCTCTCTCCGAGACAGC-GCCCAGATCGTTACGCCTTTCGTGC 2551 >seq2558221 Length=125 Score = 136 bits (150), Expect = 1e-29 Identities = 83/88 (94%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| ||| |||||| ||||||||| |||||||||||||||||||||||||||||| || Sbjct 38 TCGACCTGTCAGTCTCACAGTCAAGCCCCCTTGTGCACTTACACTCACCACCTGATTACC 97 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCC 88 |||||||||||||||||||||||||||| Sbjct 98 AACCAGGCTGAGGGAACCTTTGGGCGCC 125 >seq446766 Length=1159 Score = 113 bits (124), Expect = 1e-22 Identities = 151/207 (73%), Gaps = 5/207 (2%) Strand=Plus/Plus Query 111 ACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTT 170 ||||||||||| ||||||||||||| || ||||| | | |||||| |||| ||| ||| Sbjct 200 ACCGCCCCAGTCAAACTACCCACCACACAATGTCCTCGATCCAGATAATGGACCAGAGTT 259 Query 171 AGATATCCACTACGGT--CAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGG 228 || | || | || || ||| ||||||||||| | | |||||| |||||| Sbjct 260 AG--AACCCCAACAGTACCAGGCTGGTATTTCAAGATTGGCTCCACGTAAGCTAGCGCCT 317 Query 229 CCGCATCATAGTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTAT 288 ||| ||| || |||||| ||||||||||||| | | | ||| | ||||||| Sbjct 318 ACGCTTCAAAGCCTCCCAGCTATCCTACACAAGTAATATCAGAGTCCACTGTGAAGCTAT 377 Query 289 AGTGAAGG-TCCCGGGGTCTTTTCGTC 314 ||| |||| || |||||||||| |||| Sbjct 378 AGTAAAGGTTCACGGGGTCTTTCCGTC 404 Score = 102 bits (112), Expect = 3e-19 Identities = 86/106 (81%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||||||| |||||||||||||||| | ||| ||| ||||||| ||| | ||||| || Sbjct 27 TCGACTTGTCAGTCTCGCAGTCAAGCGCGCTTATGCCATTACACTAACCGCATGATTTCC 86 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAG 106 |||| ||| || | ||||| | || |||||||||| |||||||| Sbjct 87 GACCATGCTTAGCGCACCTTCGTGCTCCTCCGTTACTCTTTGGGAG 132 >seq2568161 Length=125 Score = 109 bits (120), Expect = 2e-21 Identities = 96/120 (80%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 300 CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 |||||||||| |||| ||||| ||| | ||||||| || | | | ||||||| | | Sbjct 6 CGGGGTCTTTCCGTCTAACCGCGGGAAGCCTGCATCTTGACAGGCAATTCAATTTCGCTG 65 Query 360 GGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 419 | | || | |||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct 66 AGTCGATGTTGGAGACAGCGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 125 >seq698051 Length=436 Score = 75.2 bits (82), Expect = 4e-11 Identities = 74/96 (77%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||||||| ||||||||||||| ||| ||| ||| || |||||| | |||| || Sbjct 364 TCGACTTGTCAGTCTCGCAGTCAGGCTGGCTTCTGCCATTGCACTCAACGAGCGATTTCC 305 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTAC 96 ||| ||||| |||||| | ||||||||||||| Sbjct 304 GACCGCTCTGAGCCAACCTTCGCGCGCCTCCGTTAC 269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634843967232