Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq2704621 149 1e-33 seq366953 84.2 4e-14 seq371971 73.4 8e-11 >seq2704621 Length=130 Score = 149 bits (164), Expect = 1e-33 Identities = 109/127 (86%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 78 TATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGA 137 |||||||| ||||||||| || ||| | ||||||| ||||| | ||||||||||||| Sbjct 4 TATAAAAGTAGTTTACAACCCATAGGGCAGTCATCCTACACGCGGCATGGCTGGTTCAGA 63 Query 138 CTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCT 197 | | ||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct 64 GTTGCCTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCT 123 Query 198 CAGTTCC 204 |||| || Sbjct 124 CAGTACC 130 >seq366953 Length=357 Score = 84.2 bits (92), Expect = 4e-14 Identities = 97/127 (76%), Gaps = 4/127 (3%) Strand=Plus/Minus Query 232 CCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCC 291 |||| ||||||| | || |||| ||||||||| |||| |||| ||||||| |||||| | Sbjct 124 CCTACCCATCGTTGCCTTGGTGAGCCGTTACCTCGCCAACTAGCTAATGGGACGCATACT 65 Query 292 CATCGTACACCGATGAATCTTTAATGATGATACCATGCA-ATCTCATCATACCATCAGGT 350 |||| | ||| || ||||||| || | |||| |||| || ||||||| |||| Sbjct 64 CATCTCTCGCCGT--AACCTTTAATTATAAATAGATGCCTATCT-ATAATACCATGAGGT 8 Query 351 ATTAATC 357 ||||||| Sbjct 7 ATTAATC 1 Score = 82.4 bits (90), Expect = 2e-13 Identities = 99/133 (74%), Gaps = 4/133 (3%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||||||||||||| | ||||||| || |||| || | |||||| Sbjct 351 GGCTGCTGGCACGGAGTTAGCCGGTCCTTATTCTTACAGTACCGTCATCACCTTACACGT 292 Query 61 GGAAGG--TTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCAC 118 |||| | || |||| |||||||| ||||||||| || ||| | || |||| ||| Sbjct 291 --AAGGCTTATTCTTCCTGTATAAAAGCAGTTTACAACCCATAGGGCAGTCTTCCTGCAC 234 Query 119 GCTACTTGGCTGG 131 || | ||||||| Sbjct 233 GCGGCATGGCTGG 221 >seq371971 Length=1724 Score = 73.4 bits (80), Expect = 8e-11 Identities = 90/122 (74%), Gaps = 1/122 (1%) Strand=Plus/Plus Query 66 GTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTT 125 || || |||| | | ||||| |||||||| || ||| ||||| ||| ||||| | Sbjct 682 GTGTTCTTCCTTGAGAAAAGGGGTTTACAACCCA-AGAGCCTTCCTCCCCCACGCGGTCT 740 Query 126 GGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTT 185 ||| |||| || || |||||| || ||||| |||||||||||||||||||||| Sbjct 741 TGCTCCGTCAGGCTTGCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTC 800 Query 186 TG 187 || Sbjct 801 TG 802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1026387001984