Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq3645668 199 1e-48 seq3178218 150 5e-34 seq751864 147 6e-33 seq2704471 141 3e-31 seq3114431 93.3 1e-16 seq578475 80.6 8e-13 seq2714143 75.2 3e-11 >seq3645668 Length=234 Score = 199 bits (220), Expect = 1e-48 Identities = 198/249 (80%), Gaps = 27/249 (11%) Strand=Plus/Minus Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||| Sbjct 234 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTTACCCGTTAAAGCCATGGT 175 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCG--CCG 237 |||||| || ||||||||| |||| |||||||||||||| |||||||| ||||| ||| Sbjct 174 AGGCCAATACCCTACCATCCAAAGCTGATAGGGCAGAAACTTGAATGATGCATCGATCCG 115 Query 238 GCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACC--AA-----GGAGCCCCGAA 290 ||| || |||| || |||||||||||||||||| || | ||||| Sbjct 114 ----AAG---AT-CGATCCG-AAAGTTATTATGAATCACCTGAATCCGGGTTGCCCC--- 67 Query 291 GGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC---GAAGTCGGGGTTTTTAGCAT 347 || |||| ||| |||||||||||||||| ||||| |||||| ||||| |||| Sbjct 66 --GCATTGG-TTTCCATCTAATAAATACACCTCTTCCAAAAAAGTCGAGGTTTGATGCAT 10 Query 348 GTATTAGCT 356 ||||||||| Sbjct 9 GTATTAGCT 1 >seq3178218 Length=157 Score = 150 bits (166), Expect = 5e-34 Identities = 123/148 (83%), Gaps = 1/148 (1%) Strand=Plus/Plus Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||| Sbjct 1 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCTCCGTTACCCGTTACGACCATGGT 60 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| || | ||||||||||||||||||||||||| |||||| || | ||||||| Sbjct 61 AGGCGCATAACGTACCATCGAAAGTTGATAGGGCAGACGTTTGAAGGATCTGTCGCCGGT 120 Query 240 TC-AAGGCCATGCGATTCGTTAAGTTAT 266 | | | || |||||| | |||||||| Sbjct 121 GCGATGACCGTGCGATCTGCTAAGTTAT 148 >seq751864 Length=2390 Score = 147 bits (162), Expect = 6e-33 Identities = 124/151 (82%), Gaps = 1/151 (1%) Strand=Plus/Minus Query 94 CTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAA-TCGAACCCTAA 152 |||||||||||||||||||||||| |||||| |||||||||||||||| | ||||||| | Sbjct 1818 CTGCCTTCCTTGGATGTGGTAGCCATTTCTCGGGCTCCCTCTCCGGAATTGGAACCCTGA 1759 Query 153 TTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGG 212 ||| | ||||||| || ||||||||||| || ||||| | ||||||||||||| Sbjct 1758 TTCTCTGTTACCCCTTACAACCATGGTAGGAGCATAATGTACCACCCAAAGTTGATAGGG 1699 Query 213 CAGAAATTTGAATGAACCATCGCCGGCTCAA 243 |||| |||||| || | |||||||| ||| Sbjct 1698 CAGATGTTTGAAGGATCAGTCGCCGGCGCAA 1668 >seq2704471 Length=130 Score = 141 bits (156), Expect = 3e-31 Identities = 91/97 (94%), Gaps = 2/97 (2%) Strand=Plus/Plus Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCAT 467 ||||| ||||||||||||||||||||||| ||||||||| | |||||||||||||||||| Sbjct 1 CTGATATAATGAGCCATTCGCAGTTTCACAGTATAGATTTGTTTATACTTAGACATGCAT 60 Query 468 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||| |||| |||||||||| Sbjct 61 GGCTTAATCTTTGAGACAAGCGTATG-CTACTGGCAG 96 >seq3114431 Length=152 Score = 93.3 bits (102), Expect = 1e-16 Identities = 79/95 (83%), Gaps = 2/95 (2%) Strand=Plus/Minus Query 342 TAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA-GTAAGGTACTATCAAATA 400 |||||||||||||||| ||||||||||| |||||||||||| | | | | || || Sbjct 94 TAGCATGTATTAGCTCAAGAATTACCACAGTTATCCATGTACGGCAACT-CATTCCAAGG 36 Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTC 435 ||| || |||||||||||||||||| ||||||||| Sbjct 35 AACTATGACTGATTTAATGAGCCATCCGCAGTTTC 1 >seq578475 Length=1248 Score = 80.6 bits (88), Expect = 8e-13 Identities = 88/111 (79%), Gaps = 6/111 (5%) Strand=Plus/Minus Query 80 AATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTC--CCTCT-C 136 ||||||| || ||||||||||||||||||||||| | |||||||||||| ||||| Sbjct 897 AATTTGCATGCTGGCTGCCTTCCTTGGATGTGGTAG-CATTTCTCAGGCTCCTCCTCTAG 839 Query 137 CGGAAT-CGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCAC 186 | || | ||||||| |||| | |||||| ||| |||||| || ||||| Sbjct 838 CTGATTGAGAACCCTGATTCTCTGTTACCTGTTTCGACCATGTTA-GCCAC 789 >seq2714143 Length=131 Score = 75.2 bits (82), Expect = 3e-11 Identities = 81/105 (77%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 133 TCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG-GCCACTATCC 191 |||| |||||||||||||||||| || ||||| || | |||||| ||| || || Sbjct 131 TCTCTGGAATCGAACCCTAATTCTCCATTACCTGTAAAGACCATGATAGTTGCATGATGG 72 Query 192 TACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCC 236 | ||||||||||||||||| | || |||||| || | |||||| Sbjct 71 T--CATCGAAAGTTGATAGGACTGATGTTTGAAGGATCTATCGCC 29 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1450463068672