Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq817554 143 2e-29 seq456579 131 1e-25 seq493597 109 4e-19 seq2673866 91.5 1e-13 >seq817554 Length=629 Score = 143 bits (158), Expect = 2e-29 Identities = 167/223 (75%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 61025 ATGAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGG 61084 |||||||||| | | ||||||||| || || || || | ||||||||| | | | | Sbjct 486 ATGAACCCCTTCTACGAGAGAATCCCCGGCGCTTTGTCGTCTTCCCCATCCAATTCCAAG 427 Query 61085 ATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATT 61144 |||| ||| |||||||| ||||| || || || |||||||||||||| ||||| ||| Sbjct 426 ATATCTGGATGATGTACAAGAAGGCAGAGGCATCATTCTGGACGGTGGAAGAGGTTGATC 367 Query 61145 TGTCCAAAGACATGAATGACTGGGAG-CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 | |||||||||||||| |||||||| | | | || | || || || || | Sbjct 366 TATCCAAAGACATGAACCACTGGGAGAAGCTGAATGA-CAACGAGAGGCACTTTATCTCA 308 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATG 61246 ||||||||||| |||||||| ||| |||||||||||||||| Sbjct 307 CATGTGTTGGCCTTCTTTGCTGCTAGTGACGGTATCGTCAATG 265 >seq456579 Length=1737 Score = 131 bits (144), Expect = 1e-25 Identities = 247/360 (69%), Gaps = 9/360 (3%) Strand=Plus/Plus Query 61288 GAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTAC 61347 || ||||| | || ||||| || ||||| ||||| || |||||||||| |||||| Sbjct 731 GAAGCGCGGTTCTTTTACGGGTTTCAGATCATGATGGAAAACATCCACTCGGAAATGTAC 790 Query 61348 AGTGTTCTCATCGATACGTACATCAGGGAG-CGGGCGGAACGTGAACGAT---TGTTCAA 61403 | ||||||| ||||| |||||| ||| | ||| || |||||| || |||| Sbjct 791 GGCCTTCTCATAGATACCTACATCCAGGATTCACGCGAAA----AACGATATTTGCTCAA 846 Query 61404 TGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCAC 61463 || || || || || || |||||||| |||||| || |||||| | | ||||||| Sbjct 847 AGCGATTGAAACTATTCCCGCGGTGAAAAAGAAAGCCGACTGGGCCCTGAGATGGATCAA 906 Query 61464 CAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATT 61523 || || | || | || | | || || || | ||||| || | || Sbjct 907 TGATAGTCGAGCCTCTTTCGCCACGAGACTCGTCGCTTTCGCCATCGTCGAAGGAATTTT 966 Query 61524 TTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCT 61583 || |||||||| ||||| || || |||||||||||| | || || ||||||||||| Sbjct 967 CTTTTCCGGATCGTTCGCCGCGATATTCTGGTTGAAGAAAAGGGGTCTGATGCCCGGTCT 1026 Query 61584 GACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGC-TGTTT 61642 ||||||| ||| || | || |||||||||| | || |||||||| || ||||| Sbjct 1027 GACCTTCTCCAACGAACTCATCAGCCGCGACGAGGCGTTACACTGTGATTTCGCTTGTTT 1086 >seq493597 Length=1331 Score = 109 bits (120), Expect = 4e-19 Identities = 130/174 (75%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 66296 TGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGT 66355 ||||| |||||||| |||| || |||| || |||||| | ||| || | ||| || Sbjct 325 TGTGGGCACATCAGACACCAGTCCCCATTCTTTTCTACTCTCTTCATGAACAAATCTGGA 384 Query 66356 ATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGCG 66414 ||||| | ||||||||| | || ||||| | | ||||| || ||| |||| | Sbjct 385 ATCCACAAGGCGTAGAACAAGTCCCGTGCCCTGTTTTCCTCCGACCCTGTGTTTTTCTTG 444 Query 66415 CAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAA 66468 || ||| ||||| ||||||||||| |||||||||||||||| |||||| || || Sbjct 445 CA-GTCCAGGAAGTCAAAGATGTCTGCATGCCATGGTTCCAAGTAGATTGCAAA 497 >seq2673866 Length=129 Score = 91.5 bits (100), Expect = 1e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 || |||||||| | ||||| | || || || ||||||||||||||||||||||| Sbjct 103 CAAGAGGTGCAGAGCACAGAGGCAAGGTGCTTTTATGGCTTCCAGATTGCCATGGAGAAC 44 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372 ||||||| || ||||||||| | |||||||| || ||||||| Sbjct 43 ATCCACTCAGAAATGTACAGTCTACTCATCGACACATACATCA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 378340245128480