Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq583819 114 4e-21 >seq583819 Length=2165 Score = 114 bits (126), Expect = 4e-21 Identities = 168/236 (71%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 2676 TGCTAACTCAATCCTTATCAAAGTTAACCAAATCGGTACTTTGACTGAAACTTTTGACGC 2735 |||||| ||||| || || || ||||||||||| || ||||| || |||||||| || | Sbjct 2093 TGCTAATTCAATTCTGATTAAGGTTAACCAAATTGGGACTTTAACGGAAACTTTAGATAC 2034 Query 2736 TATCGAAATGGCGAAAGAAGCTGGATACACAGCAGTAGTATCACACCGTTCAGGTGAAAC 2795 || || |||||||| || | |||| | || || ||||||||||| ||||| Sbjct 2033 AATTGAGTTGGCGAAAAAACATAATTACAAGTGCTTTGTGTCCCACCGTTCAGGAGAAAC 1974 Query 2796 TGAAGATTCAACAATCGCTGATATTGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGG 2855 |||||| | || ||| | ||| | | || |||||| | | ||| |||| || || || Sbjct 1973 GGAAGATACTACTATCTCGGATTTGGTGGTGGCAACTTGCACAGGTAAAATCAAAACTGG 1914 Query 2856 TTC--ATTGTCACGTACTGACCGTATTGCTAAATACAACCAATTGCTTCGTATCGA 2909 ||| ||||| || ||| || | ||||||| |||||| |||| || || || Sbjct 1913 TTCGGGTTGTCGCG--GTGAACGGACGGCTAAATTTAACCAACTGCTACGCATTGA 1860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148685348058408