Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_031903.1 Length=172345 Score E Sequences producing significant alignments: (Bits) Value seq577692 432 4e-116 seq856283 347 1e-90 seq3816217 282 4e-71 seq3751544 271 8e-68 seq3654882 143 3e-29 seq940596 138 1e-27 seq3172301 122 9e-23 seq3509123 116 4e-21 seq2226574 87.8 2e-12 >seq577692 Length=2825 Score = 432 bits (478), Expect = 4e-116 Identities = 520/707 (74%), Gaps = 0/707 (0%) Strand=Plus/Plus Query 159794 TGGGAATCATTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTC 159853 |||||| || ||| |||||||| ||||||||||||||||| ||||| |||||||| Sbjct 165 TGGGAACAGTTTTGCACTTGGGTAACATCTACCAATAACCGCCTTTATGTAGGTTGGTTT 224 Query 159854 GGCGTCCTGATGATCCCAACTCTGTTGGCAGCAACTATCTGCTTCATCGTCGCCTTCATC 159913 || | |||||||||| || || | | || || ||||| || | | || || | Sbjct 225 GGTATTGTGATGATCCCTACCTTGCTAACTGCCACCATCTGTTTTGTGTTAGCTTTTGTA 284 Query 159914 GCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTAC 159973 ||||| || |||||||| || || |||||||| |||||||| | ||||| || ||||| Sbjct 285 GCTGCACCTCCTGTGGATATTGACGGCATCCGCGAACCCGTTTCCGGTTCTCTGTTGTAC 344 Query 159974 GGTAACAACATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTTCACTTC 160033 || || ||||||||| | | || ||||| ||| ||| || || ||||| | ||||| Sbjct 345 GGCAATAACATCATCACCGCCGCTGTTGTACCCAGTTCTAATGCGATTGGGTTGCACTTT 404 Query 160034 TATCCCATTTGGGAAGCCGCATCGCTCGACGAGTGGCTCTATAACGGTGGTCCTTTCCAA 160093 |||||||| |||||||| ||| | || || ||||| |||||||| || || | ||| Sbjct 405 TATCCCATCTGGGAAGCGGCAAATATTGATGAATGGCTTTATAACGGCGGCCCCTACCAG 464 Query 160094 CTCGTAGTCTTCCACTTCCTGATCGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTC 160153 | | || ||||||||||| |||||||| | | |||||||||||||||||||||||| Sbjct 465 TTGATTGTTTTCCACTTCCTAATCGGCATTTTTTGCTATATGGGTCGTGAGTGGGAACTG 524 Query 160154 TCTTACCGTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCT 160213 ||||| || | || |||||||| ||||| |||||| || ||||| || |||||| Sbjct 525 TCTTATCGGTTAGGAATGCGTCCTTGGATTGCTGTTGCTTATAGCGCTCCTGTAGCTGCT 584 Query 160214 GCTTCTGCTGTATTCCTCGTCTACCCCTTCGGTCAGGGTTCTTTCTCCGATGCTATGCCT 160273 || | || ||| | | || || | ||||||| |||||||| || |||| | | || Sbjct 585 GCGACGGCGGTACTGTTAGTTTATTCTATCGGTCAAGGTTCTTTTTCTGATGGTTTACCG 644 Query 160274 CTTGGTATCTCTGGTACTTTTAACTATATGCTTGTATTCCAAGCAGAACACAATATCCTT 160333 || || || ||||| || ||||||| |||| | || | |||||||| || ||| | | Sbjct 645 CTGGGGATTTCTGGCACATTTAACTTTATGTTAGTGCTGCAAGCAGAGCATAATGTTTTA 704 Query 160334 ATGCATCCGTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTGTTCTCTGCT 160393 ||||| || ||||| ||||| || || ||||| || || ||||| |||| ||||| ||| Sbjct 705 ATGCACCCCTTCCATATGCTGGGAGTAGCTGGTGTCTTTGGTGGCGCTCTTTTCTCAGCT 764 Query 160394 ATGCATGGATCTCTGGTTACTTCTAGTCTCGTCAGAGAGACGACAGAAACTGAGTCCCAG 160453 ||||| || |||||||| || ||| | | || | || || || |||| ||| ||| Sbjct 765 ATGCACGGTTCTCTGGTGACATCTTCTTTAGTACGTGAAACCACTGAAATTGAAAGCCAA 824 Query 160454 AACTATGGTTACAAGTTCGGTCAAGAGGAAGAGACTTACAACATCGT 160500 ||| ||||| || || ||||| ||||| ||||| ||||| || Sbjct 825 AACCGGGGTTATCGCTTTGGACAAGAAGAAGAAACTTATAACATTGT 871 >seq856283 Length=1080 Score = 347 bits (384), Expect = 1e-90 Identities = 438/602 (73%), Gaps = 0/602 (0%) Strand=Plus/Minus Query 161513 GGTTCGATGTCCTTGACGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGCTGGTCTG 161572 |||| |||||||| || |||||||| || || ||||| ||||| ||||| || ||||| | Sbjct 1080 GGTTTGATGTCCTCGATGACTGGCTGAAGCGCGATCGGTTCGTATTTGTGGGATGGTCGG 1021 Query 161573 GACTTCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACGACTT 161632 | | || ||||| ||| || ||||| |||| || || ||| | || || || || | Sbjct 1020 GTATCCTGCTTTTCCCCTGCGCCTATCTATCTATCGGGGGATGGTTGACAGGAACCACCT 961 Query 161633 TCGCTACGAGCTGGTATACCCATGGACTCGCTAGTTCCTATCTTGAGGGTGCAAATTTTC 161692 | | ||| ||||| ||||| |||||||| |||||||| || || ||| || |||| Sbjct 960 TTGTTACCTCTTGGTACACCCACGGACTCGCCAGTTCCTACCTAGAAGGTTGCAACTTTC 901 Query 161693 TTACAGCGGCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTTCTCTGGG 161752 | || || || || ||||| || ||| || | |||| || || || || | || |||| Sbjct 900 TGACCGCTGCCGTCAGCACCCCCGCTAACAGTTTGGGGCACTCCCTACTGTTCCTGTGGG 841 Query 161753 GTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGAATTTTG 161812 |||| || ||||| |||| || | | ||| |||| | ||||| | ||| ||||| Sbjct 840 GTCCCGAAGCTCAGTGGGACTTTACCCGCTGGTGCCAATTAGGGGGTTTATGGGCTTTTG 781 Query 161813 TGGCGCTCCACGGGGCTTTCGCTCTGATTGGATTCATGCTTCGTCAGTTTGAACTTGCTC 161872 | || || || || |||||||| |||||||| ||| || |||||||| ||| | || | Sbjct 780 TAGCCCTGCATGGAGCTTTCGCACTGATTGGGTTCTGCCTGCGTCAGTTGGAAATCGCCC 721 Query 161873 GTCTTATCGGTATCCGTCCTTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGTTTTTG 161932 | | | || || |||||||| ||||| || |||||| | || |||||||| || || | Sbjct 720 GGTTGGTTGGCATTCGTCCTTATAATGCGATCGCTTTCACCGGCCCTATTGCCGTGTTCG 661 Query 161933 TCAGCGTCTTTCTCATATATCCTCTGGGACAGTCGTCCTGGTTCTTCGCGCCATCGTTTG 161992 | ||||| || | || || || |||| || || |||||||| || || |||| Sbjct 660 TGAGCGTATTCTTAATGTACCCCTTGGGTCAATCTGGATGGTTCTTTGCTCCCAGCTTTG 601 Query 161993 GGGTTGCCGCTATTTTCAGGTTCTTACTTTTCCTACAAGGTTTCCACAATTGGACGCTTA 162052 | || || | || ||| |||| | || ||| | ||||| |||||||| |||||||| | Sbjct 600 GTGTAGCAGGCATCTTCCGGTTTATCCTATTCTTCCAAGGATTCCACAACTGGACGCTCA 541 Query 162053 ATCCGTTCCACATGATGGGTGTCGCAGGTATCTTGGGTGGTGCTTTGCTCTCTGCTATTC 162112 | || |||||||||||||| || || || ||| |||||||||| | |||| |||||||| Sbjct 540 ACCCCTTCCACATGATGGGAGTTGCCGGCATCCTGGGTGGTGCGCTACTCTGTGCTATTC 481 Query 162113 AC 162114 || Sbjct 480 AC 479 Score = 118 bits (130), Expect = 1e-21 Identities = 137/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 162143 AAGATGGTGAACAAGCAAATACTTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAGACTT 162202 |||| || ||| | | || || ||| |||||||| | || |||| || || || | Sbjct 418 AAGACGGAGAAGGATCTAACACCTTCCGTGCTTTTGAACCCACCCAAGCCGAAGAAACCT 359 Query 162203 ACTCGATGGTTACTGCGAACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAATA 162262 |||| ||||| || || ||||| |||||||| ||||| ||||||||||||||| || | Sbjct 358 ACTCCATGGTGACAGCTAACCGCTTCTGGTCCCAGATTTTCGGTATTGCTTTTTCCAACA 299 Query 162263 AGCGTTGGTTGCATTTCTTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCTA 162322 | || ||||| || ||||| ||||| || ||||| || | || || |||| |||| | Sbjct 298 AACGCTGGTTACACTTCTTCATGCTGTTTGTTCCTGTAACAGGGCTGTGGATGTGTTCCA 239 Query 162323 TCGGT 162327 ||||| Sbjct 238 TCGGT 234 >seq3816217 Length=329 Score = 282 bits (312), Expect = 4e-71 Identities = 260/329 (79%), Gaps = 0/329 (0%) Strand=Plus/Plus Query 160310 TTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGGGTA 160369 ||||||||||||||||| ||||| ||||| || ||||| ||| | || |||||||| ||| Sbjct 1 TTCCAAGCAGAACACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTTGCTGGTGTA 60 Query 160370 TTCGGTGGATCTCTGTTCTCTGCTATGCATGGATCTCTGGTTACTTCTAGTCTCGTCAGA 160429 |||||||| || ||||||| || ||||| || ||| |||| |||||| | || | Sbjct 61 TTCGGTGGTGCTTTGTTCTCCGCGATGCACGGTTCTTTGGTAACTTCTTCCTTGGTGCGT 120 Query 160430 GAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAGGAAGAGACT 160489 || || || |||| || || || ||||| |||||||| ||||||||||| ||||| || Sbjct 121 GAAACCACCGAAATCGAATCTCAAAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACC 180 Query 160490 TACAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCATCCTTT 160549 |||||||| || ||||| || || ||||||||||| |||||||||||||||| || || Sbjct 181 TACAACATTGTGGCAGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATATGCTTCTTTC 240 Query 160550 AACAACTCACGCTCTCTGCACTTCTTCCTCGCTGCTTGGCCTGTTGTTGGAATCTGGTTC 160609 |||||| || || |||||||||||| | | ||||||||| || | || ||||||||| Sbjct 241 AACAACAGCCGTTCCCTGCACTTCTTCTTGGGTGCTTGGCCGGTAATCGGCATCTGGTTC 300 Query 160610 ACTGCCCTTGGTGTTTCTACCATGGCATT 160638 || || | ||||| || |||||||| || Sbjct 301 ACCGCTTTAGGTGTATCCACCATGGCCTT 329 >seq3751544 Length=281 Score = 271 bits (300), Expect = 8e-68 Identities = 225/275 (82%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 159812 TGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTCCTGATGATCCCA 159871 |||||||| || ||||| |||||||| ||||| || |||||||| || ||||||||||| Sbjct 7 TGGGTAACATCCACCAACAACCGCCTTTATGTAGGCTGGTTCGGTGTTCTGATGATCCCT 66 Query 159872 ACTCTGTTGGCAGCAACTATCTGCTTCATCGTCGCCTTCATCGCTGCTCCCCCTGTGGAC 159931 || || | | || || ||||||| |||| |||| || |||||||||||||| |||||| Sbjct 67 ACCCTACTAACTGCTACCATCTGCTACATCATCGCTTTTATCGCTGCTCCCCCCGTGGAC 126 Query 159932 ATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTACGGTAACAACATCATCTCT 159991 || || || ||||| |||||||| |||||||| || ||||||| ||||||||||||||| Sbjct 127 ATTGACGGTATCCGCGAACCCGTAGCTGGTTCTCTGTTGTACGGCAACAACATCATCTCT 186 Query 159992 GGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTTCACTTCTATCCCATTTGGGAAGCC 160051 ||||| |||||||| || ||||| || || ||||| |||||||| |||||||||||||| Sbjct 187 GGTGCGGTTGTTCCTTCCTCCAATGCGATCGGTCTGCACTTCTACCCCATTTGGGAAGCA 246 Query 160052 GCATCGCTCGACGAGTGGCTCTATAACGGTGGTCC 160086 || | || || |||||||| |||||||| || Sbjct 247 GCCAGCTTGGATGAATGGCTCTACAACGGTGGCCC 281 >seq3654882 Length=237 Score = 143 bits (158), Expect = 3e-29 Identities = 171/232 (74%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 162143 AAGATGGTGAACAAGCAAATACTTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAGACTT 162202 |||| || ||| | | || || ||| || ||||| | || |||| ||| || || | Sbjct 234 AAGACGGAGAAGGATCTAACACCTTCCGAGCCTTTGAACCGACCCAAGCGGAAGAAACCT 175 Query 162203 ACTCGATGGTTACTGCGAACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAATA 162262 | || ||||| || || ||||| || ||||| || || ||||||||||||||| || | Sbjct 174 ATTCCATGGTGACAGCCAACCGCTTTTGGTCTCAAATTTTCGGTATTGCTTTTTCAAACA 115 Query 162263 AGCGTTGGTTGCATTTCTTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCTA 162322 | |||||||| || ||||| ||||| ||||||||||| | ||||| |||| |||| | Sbjct 114 AACGTTGGTTACACTTCTTCATGCTGTTCGTTCCCGTAACAGGTCTGTGGATGTGTTCCA 55 Query 162323 TCGGTATTATTGGACTCGCTCTTAATCTTCGTGCTTACGACTTTGTATCTCA 162374 ||||| | | || || ||| | || || |||||||| ||||| || || || Sbjct 54 TCGGTGTAGTGGGTCTAGCTGTAAACCTGCGTGCTTATGACTTCGTGTCACA 3 >seq940596 Length=2461 Score = 138 bits (152), Expect = 1e-27 Identities = 151/201 (75%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 160953 TTGTGAGGATGATCAATATGTCCTTGACGCTGCTGATGAAGCAGGTGTTGACGGACCCTA 161012 ||| || |||||| |||| | || || ||||| || ||||| || | || ||||| Sbjct 1395 TTGCGATGATGATACATATATTCTCGATGCTGCCGAAGAAGCTGGACTAGATCTGCCCTA 1336 Query 161013 CTCCTGTCGTGCTGGTGCTTGCTCTACTTGTGCTGGTAAGATTGAGAGTGGTACTGTAGA 161072 |||||| ||||||||||||||||| || |||||||||| || |||||||| | || Sbjct 1335 CTCCTGCCGTGCTGGTGCTTGCTCCACCTGTGCTGGTACAATCACCAGTGGTACCATTGA 1276 Query 161073 TCAATCTGATCAATCTTTCCTGGATGATGATCAACTTGAATCAGGATTTGTCCTGACCTG 161132 || |||||||| |||||| | ||||||||||| | ||| | || | ||| |||| || Sbjct 1275 CCAGTCTGATCAGTCTTTCTTAGATGATGATCAGATCGAAGCTGGGTATGTTTTGACTTG 1216 Query 161133 CGTTGCTTATCCCACTTCTGA 161153 || || |||||||| || || Sbjct 1215 TGTAGCCTATCCCACCTCCGA 1195 >seq3172301 Length=157 Score = 122 bits (134), Expect = 9e-23 Identities = 114/145 (79%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 160154 TCTTACCGTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCT 160213 || ||||| | || |||||||| |||||||| || || ||| || || || || ||| Sbjct 155 TCCTACCGCTTGGGAATGCGTCCTTGGATCTGCGTAGCTTACAGCGCACCTGTTGCGGCT 96 Query 160214 GCTTCTGCTGTATTCCTCGTCTACCCCTTCGGTCAGGGTTCTTTCTCCGATGCTATGCCT 160273 ||| ||| |||||| | |||||||| |||| || |||||||||||||| | ||||||| Sbjct 95 GCTAGTGCAGTATTCTTGATCTACCCCATCGGACAAGGTTCTTTCTCCGACGGTATGCCT 36 Query 160274 CTTGGTATCTCTGGTACTTTTAACT 160298 || |||||||| || ||||| |||| Sbjct 35 CTGGGTATCTCCGGAACTTTCAACT 11 >seq3509123 Length=199 Score = 116 bits (128), Expect = 4e-21 Identities = 117/152 (77%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 160646 AATGGTTTCAACTTCAACCAGTCCATCTTGGACAACCAAGGACAAGTTCTGAACACTTGG 160705 || ||||||||||||||||| ||| | ||||| | || | || | ||||| ||| Sbjct 1 AACGGTTTCAACTTCAACCAATCCGTAATGGACTCCAGCGGTCGGGTAGTTAACACCTGG 60 Query 160706 GCAGACGTGCTTAACCGCGCTGGTCTGGGCATGGAAGTCATGCACGAGCGTAACGCTCAC 160765 || || || | ||||||||| ||||| |||||||| ||||||||||| ||||||||| Sbjct 61 GCTGATGTCATCAACCGCGCTAACCTGGGTATGGAAGTAATGCACGAGCGCAACGCTCAC 120 Query 160766 AACTTCCCTCTCGACCTTGCTGCTGCTGAGTC 160797 |||||||| | || | ||| |||||||||| Sbjct 121 AACTTCCCCTTAGATTTAGCTTCTGCTGAGTC 152 >seq2226574 Length=116 Score = 87.8 bits (96), Expect = 2e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 162030 AGGTTTCCACAATTGGACGCTTAATCCGTTCCACATGATGGGTGTCGCAGGTATCTTGGG 162089 ||| |||||||| ||||| || || || |||||||||||||| || || || ||| | || Sbjct 1 AGGATTCCACAACTGGACTCTAAACCCCTTCCACATGATGGGAGTTGCGGGAATCCTCGG 60 Query 162090 TGGTGCTTTGCTCTCTGCTATTCACGGTGTGACTGTTGAAAACACGCT 162137 ||||| | || | ||||||||| |||| || || |||||||| || Sbjct 61 CGGTGCGCTACTATGTGCTATTCATGGTGCTACAGTAGAAAACACCCT 108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524025806799600