Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_031906.1 Length=198190 Score E Sequences producing significant alignments: (Bits) Value seq577692 455 4e-123 seq856283 354 1e-92 seq3816217 318 7e-82 seq3751544 293 3e-74 seq3654882 165 1e-35 seq658184 118 1e-21 seq3172301 113 5e-20 seq2226574 100 3e-16 seq3509123 96.9 4e-15 seq1238013 86.0 8e-12 >seq577692 Length=2825 Score = 455 bits (504), Expect = 4e-123 Identities = 528/709 (74%), Gaps = 2/709 (0%) Strand=Plus/Plus Query 188841 TTGGGAATCATTCTGCGAATGGGTCACCTCTACTAACAACCGTCTGTATGTCGGTTGGTT 188900 ||||||| || ||| ||||| || ||||| || ||||| || ||||| |||||||| Sbjct 164 TTGGGAACAGTTTTGCACTTGGGTAACATCTACCAATAACCGCCTTTATGTAGGTTGGTT 223 Query 188901 CGGTGTCCTGATGATCCCTACGCTTCTCGCTGCAACCATCTGCTTCATCGTCGCCTTTGT 188960 ||| | ||||||||||||| | || |||| |||||||| || | | || ||||| Sbjct 224 TGGTATTGTGATGATCCCTACCTTGCTAACTGCCACCATCTGTTTTGTGTTAGCTTTTGT 283 Query 188961 CGCTGCACCCCCTGTAGACATTGATGGCATCCGCGAACCCGTCGCTGGTTCACTCATGTA 189020 |||||||| ||||| || ||||| ||||||||||||||||| | ||||| || |||| Sbjct 284 AGCTGCACCTCCTGTGGATATTGACGGCATCCGCGAACCCGTTTCCGGTTCTCTGTTGTA 343 Query 189021 TGGAAACAACATCATCTCTGGTGCTGTTGTCCCTTCATCCAACGCAATTGGTCTTCACTT 189080 || || ||||||||| | | |||||||| || || || || ||||| | ||||| Sbjct 344 CGGCAATAACATCATCACCGCCGCTGTTGTACCCAGTTCTAATGCGATTGGGTTGCACTT 403 Query 189081 CTACCCCATCTGGGAAGCCGCCTCACTCGATGAGTGGCTCTACAACGGTGGTCCTTTCCA 189140 || |||||||||||||| || | ||||| ||||| || ||||| || || | ||| Sbjct 404 TTATCCCATCTGGGAAGCGGCAAATATTGATGAATGGCTTTATAACGGCGGCCCCTACCA 463 Query 189141 ACTGGTAGTCTTCCACTTCCTCATCGGCATCTACGCCTACATGGGTCGTGAGTGGGAACT 189200 || | || ||||||||||| |||||||| | ||| |||||||||||||||||||| Sbjct 464 GTTGATTGTTTTCCACTTCCTAATCGGCATTTTTTGCTATATGGGTCGTGAGTGGGAACT 523 Query 189201 CTCTTACCGTCTCGGTATGCGTCCTTGGATCTGC-ATTGCTTACTCTGCACCTGTTGCAG 189259 ||||| || | || |||||||||||||| ||| ||||||| || ||||| || | Sbjct 524 GTCTTATCGGTTAGGAATGCGTCCTTGGAT-TGCTGTTGCTTATAGCGCTCCTGTAGCTG 582 Query 189260 CAGCATCCGCAGTCTTTCTGGTCTATCCTTTTGGTCAAGGTTCTTTCTCTGACGCAATGC 189319 | || | || || | | || ||| || | |||||||||||||| ||||| | | | Sbjct 583 CTGCGACGGCGGTACTGTTAGTTTATTCTATCGGTCAAGGTTCTTTTTCTGATGGTTTAC 642 Query 189320 CCTTGGGTATCAGTGGAACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCC 189379 | |||| || ||| || || |||| ||| | || | ||||||||||| || | Sbjct 643 CGCTGGGGATTTCTGGCACATTTAACTTTATGTTAGTGCTGCAAGCAGAGCATAATGTTT 702 Query 189380 TGATGCACCCCTTCCACATGCTGGGAGTCGCAGGTGTCTTCGGTGGTTCACTGTTCTCCG 189439 | |||||||||||||| ||||||||||| || |||||||| ||||| | || ||||| | Sbjct 703 TAATGCACCCCTTCCATATGCTGGGAGTAGCTGGTGTCTTTGGTGGCGCTCTTTTCTCAG 762 Query 189440 CAATGCATGGTTCACTCGTTACCTCTTCACTGGTTCGTGAAACCACTGAAACCGAGTCCC 189499 | ||||| ||||| || || || ||||| | || |||||||||||||||| || || Sbjct 763 CTATGCACGGTTCTCTGGTGACATCTTCTTTAGTACGTGAAACCACTGAAATTGAAAGCC 822 Query 189500 AGAACTATGGTTACAAGTTTGGACAAGAAGAAGAAACGTACAACATCGT 189548 | ||| ||||| |||||||||||||||||||| || ||||| || Sbjct 823 AAAACCGGGGTTATCGCTTTGGACAAGAAGAAGAAACTTATAACATTGT 871 >seq856283 Length=1080 Score = 354 bits (392), Expect = 1e-92 Identities = 432/589 (73%), Gaps = 0/589 (0%) Strand=Plus/Minus Query 189985 GGTTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCTG 190044 ||||||| |||| ||||||||||| || || ||||| || || |||||||| ||||| | Sbjct 1080 GGTTTGATGTCCTCGATGACTGGCTGAAGCGCGATCGGTTCGTATTTGTGGGATGGTCGG 1021 Query 190045 GATTACTTCTTTTTCCCACTGCTTATCTCGCAATTGGTGGCTGGCTTACTGGCACGACGT 190104 | | || ||||| ||| || ||||| | || || || ||| | || || || || | Sbjct 1020 GTATCCTGCTTTTCCCCTGCGCCTATCTATCTATCGGGGGATGGTTGACAGGAACCACCT 961 Query 190105 TTGCTACAAGCTGGTACACCCACGGACTCGCAAGTAGTTACCTTGAGGGTGCTAATTTTC 190164 ||| ||| |||||||||||||||||||| ||| ||||| || ||| || |||| Sbjct 960 TTGTTACCTCTTGGTACACCCACGGACTCGCCAGTTCCTACCTAGAAGGTTGCAACTTTC 901 Query 190165 TTACAGCGGCTGTGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGG 190224 | || || || || || || ||| | | |||| || || || || | || |||| Sbjct 900 TGACCGCTGCCGTCAGCACCCCCGCTAACAGTTTGGGGCACTCCCTACTGTTCCTGTGGG 841 Query 190225 GTCCTGAATCTCAAGGCGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGGCTTTTG 190284 |||| ||| |||| | || || | | ||| |||| | ||||| | |||||||||| Sbjct 840 GTCCCGAAGCTCAGTGGGACTTTACCCGCTGGTGCCAATTAGGGGGTTTATGGGCTTTTG 781 Query 190285 TGGCGCTCCACGGGGCTTTCGCTCTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCAC 190344 | || || || || |||||||| || ||||| ||| || |||||||| ||| | || | Sbjct 780 TAGCCCTGCATGGAGCTTTCGCACTGATTGGGTTCTGCCTGCGTCAGTTGGAAATCGCCC 721 Query 190345 GTCTCATCGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTG 190404 | | | || || |||||||| ||||| || || ||| | || ||||| || || || | Sbjct 720 GGTTGGTTGGCATTCGTCCTTATAATGCGATCGCTTTCACCGGCCCTATTGCCGTGTTCG 661 Query 190405 TTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTCTTCGCGCCATCCTTCG 190464 | ||||| || | || ||||| |||||||||| | |||||||| || || ||| | Sbjct 660 TGAGCGTATTCTTAATGTACCCCTTGGGTCAATCTGGATGGTTCTTTGCTCCCAGCTTTG 601 Query 190465 GTGTGGCAGCGATCTTCCGCTTCCTCCTCTTCTTGCAGGGCTTCCATAACTGGACGCTGA 190524 |||| |||| |||||||| || |||| ||||| || || ||||| ||||||||||| | Sbjct 600 GTGTAGCAGGCATCTTCCGGTTTATCCTATTCTTCCAAGGATTCCACAACTGGACGCTCA 541 Query 190525 ACCCCTTCCACATGATGGGTGTTGCAGGTATCCTGGGAGGAGCACTACT 190573 ||||||||||||||||||| ||||| || |||||||| || || ||||| Sbjct 540 ACCCCTTCCACATGATGGGAGTTGCCGGCATCCTGGGTGGTGCGCTACT 492 Score = 113 bits (124), Expect = 5e-20 Identities = 146/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 190613 TGAAGATGGTGAACAAGCAAACACGTTTAAAGCATTCGACTCTACACAAGAGGAAGAGAC 190672 |||||| || ||| | | ||||| || || || || | || |||| ||||| || Sbjct 420 TGAAGACGGAGAAGGATCTAACACCTTCCGTGCTTTTGAACCCACCCAAGCCGAAGAAAC 361 Query 190673 CTATTCGATGGTCACTGCCAACCGTTTCTGGTCTCAAATCTTTGGTGTTGCGTTCAGTAA 190732 ||| || ||||| || || ||||| |||||||| || || || ||| |||| || || Sbjct 360 CTACTCCATGGTGACAGCTAACCGCTTCTGGTCCCAGATTTTCGGTATTGCTTTTTCCAA 301 Query 190733 TAAGAGGTGGTTGCATTTCTTTATGCTCTTTGTTCCTGTTATGGGTCTGTGGACTTCTTC 190792 || | ||||| || ||||| ||||| ||||||||||| | || ||||||| | ||| Sbjct 300 CAAACGCTGGTTACACTTCTTCATGCTGTTTGTTCCTGTAACAGGGCTGTGGATGTGTTC 241 Query 190793 CATCGGTATTATTGGTCTTGCT 190814 ||||||| | | ||||| ||| Sbjct 240 CATCGGTGTAGTAGGTCTAGCT 219 >seq3816217 Length=329 Score = 318 bits (352), Expect = 7e-82 Identities = 268/329 (81%), Gaps = 0/329 (0%) Strand=Plus/Plus Query 189358 TTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGCTGGGAGTCGCAGGTGTC 189417 ||||||||||| |||||||||||||||||||||||||| ||| ||||||| || ||||| Sbjct 1 TTCCAAGCAGAACACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTTGCTGGTGTA 60 Query 189418 TTCGGTGGTTCACTGTTCTCCGCAATGCATGGTTCACTCGTTACCTCTTCACTGGTTCGT 189477 ||||||||| | |||||||||| ||||| ||||| | || || ||||| |||| ||| Sbjct 61 TTCGGTGGTGCTTTGTTCTCCGCGATGCACGGTTCTTTGGTAACTTCTTCCTTGGTGCGT 120 Query 189478 GAAACCACTGAAACCGAGTCCCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAAACG 189537 |||||||| |||| ||| || || ||||| |||||||| || || |||||||||||||| Sbjct 121 GAAACCACCGAAATCGAATCTCAAAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACC 180 Query 189538 TACAACATCGTTGCTGCTCATGGATATTTCGGTCGTCTTATCTTCCAATATGCATCGTTC 189597 |||||||| || || ||||| || || |||||||| || |||||||||||||| || ||| Sbjct 181 TACAACATTGTGGCAGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATATGCTTCTTTC 240 Query 189598 AACAACTCCCGTTCACTTCACTTCTTCCTCGCTGCCTGGCCAGTCGTGGGTATCTGGTTT 189657 |||||| |||||| || ||||||||| | | ||| ||||| || | || |||||||| Sbjct 241 AACAACAGCCGTTCCCTGCACTTCTTCTTGGGTGCTTGGCCGGTAATCGGCATCTGGTTC 300 Query 189658 ACCGCCCTCGGCGTCAGCACCATGGCATT 189686 ||||| | || || ||||||||| || Sbjct 301 ACCGCTTTAGGTGTATCCACCATGGCCTT 329 >seq3751544 Length=281 Score = 293 bits (324), Expect = 3e-74 Identities = 230/275 (84%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 188860 TGGGTCACCTCTACTAACAACCGTCTGTATGTCGGTTGGTTCGGTGTCCTGATGATCCCT 188919 ||||| || || || |||||||| || ||||| || ||||||||||| |||||||||||| Sbjct 7 TGGGTAACATCCACCAACAACCGCCTTTATGTAGGCTGGTTCGGTGTTCTGATGATCCCT 66 Query 188920 ACGCTTCTCGCTGCAACCATCTGCTTCATCGTCGCCTTTGTCGCTGCACCCCCTGTAGAC 188979 || || || |||| |||||||||| |||| |||| ||| ||||||| ||||| || ||| Sbjct 67 ACCCTACTAACTGCTACCATCTGCTACATCATCGCTTTTATCGCTGCTCCCCCCGTGGAC 126 Query 188980 ATTGATGGCATCCGCGAACCCGTCGCTGGTTCACTCATGTATGGAAACAACATCATCTCT 189039 ||||| || |||||||||||||| |||||||| || |||| || ||||||||||||||| Sbjct 127 ATTGACGGTATCCGCGAACCCGTAGCTGGTTCTCTGTTGTACGGCAACAACATCATCTCT 186 Query 189040 GGTGCTGTTGTCCCTTCATCCAACGCAATTGGTCTTCACTTCTACCCCATCTGGGAAGCC 189099 ||||| ||||| ||||| ||||| || || ||||| |||||||||||||| |||||||| Sbjct 187 GGTGCGGTTGTTCCTTCCTCCAATGCGATCGGTCTGCACTTCTACCCCATTTGGGAAGCA 246 Query 189100 GCCTCACTCGATGAGTGGCTCTACAACGGTGGTCC 189134 ||| | ||||| ||||||||||||||||| || Sbjct 247 GCCAGCTTGGATGAATGGCTCTACAACGGTGGCCC 281 >seq3654882 Length=237 Score = 165 bits (182), Expect = 1e-35 Identities = 178/236 (75%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 190613 TGAAGATGGTGAACAAGCAAACACGTTTAAAGCATTCGACTCTACACAAGAGGAAGAGAC 190672 |||||| || ||| | | ||||| || ||| || || | || |||| |||||| || Sbjct 236 TGAAGACGGAGAAGGATCTAACACCTTCCGAGCCTTTGAACCGACCCAAGCGGAAGAAAC 177 Query 190673 CTATTCGATGGTCACTGCCAACCGTTTCTGGTCTCAAATCTTTGGTGTTGCGTTCAGTAA 190732 |||||| ||||| || |||||||| || ||||||||||| || ||| |||| || || Sbjct 176 CTATTCCATGGTGACAGCCAACCGCTTTTGGTCTCAAATTTTCGGTATTGCTTTTTCAAA 117 Query 190733 TAAGAGGTGGTTGCATTTCTTTATGCTCTTTGTTCCTGTTATGGGTCTGTGGACTTCTTC 190792 || | ||||| || ||||| ||||| || ||||| || | |||||||||| | ||| Sbjct 116 CAAACGTTGGTTACACTTCTTCATGCTGTTCGTTCCCGTAACAGGTCTGTGGATGTGTTC 57 Query 190793 CATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAG 190848 ||||||| | | ||||| ||| | ||||| |||||||||||||| || || |||| Sbjct 56 CATCGGTGTAGTGGGTCTAGCTGTAAACCTGCGTGCTTATGACTTCGTGTCACAAG 1 >seq658184 Length=760 Score = 118 bits (130), Expect = 1e-21 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 189985 GGTTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCTG 190044 ||||||| |||| ||||||||||| || || ||||||||||| || || || ||||||| Sbjct 162 GGTTTGATGTCCTCGATGACTGGCTGAAGCGTGATCGCTTTGTATTCGTAGGATGGTCTG 103 Query 190045 GATTACTTCTTTTTCCCACTGCTTATCTCGCAATTGGTGGCTGGCTTACTGGCACGACGT 190104 | | || ||||| ||| ||| ||||| | || || || ||||| || || || || | Sbjct 102 GTATCCTGCTTTTCCCCTGTGCCTATCTATCTATCGGCGGATGGCTCACCGGAACTACCT 43 Query 190105 TTGCTACAAGCTGGTACACCCACGGACTCGCAAGT 190139 ||| ||| |||||||| ||||||||||| ||| Sbjct 42 TTGTTACCTCTTGGTACACTCACGGACTCGCCAGT 8 >seq3172301 Length=157 Score = 113 bits (124), Expect = 5e-20 Identities = 115/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 189202 TCTTACCGTCTCGGTATGCGTCCTTGGATCTGCATTGCTTACTCTGCACCTGTTGCAGCA 189261 || ||||| | || |||||||||||||||||| | |||||| ||||||||||| || Sbjct 155 TCCTACCGCTTGGGAATGCGTCCTTGGATCTGCGTAGCTTACAGCGCACCTGTTGCGGCT 96 Query 189262 GCATCCGCAGTCTTTCTGGTCTATCCTTTTGGTCAAGGTTCTTTCTCTGACGCAATGCCC 189321 || ||||| || || |||| || | || |||||||||||||| |||| ||||| Sbjct 95 GCTAGTGCAGTATTCTTGATCTACCCCATCGGACAAGGTTCTTTCTCCGACGGTATGCCT 36 Query 189322 TTGGGTATCAGTGGAACCTTCAACTACATG 189351 |||||||| ||||| ||||||| |||| Sbjct 35 CTGGGTATCTCCGGAACTTTCAACTTCATG 6 >seq2226574 Length=116 Score = 100 bits (110), Expect = 3e-16 Identities = 91/115 (79%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 190503 GGCTTCCATAACTGGACGCTGAACCCCTTCCACATGATGGGTGTTGCAGGTATCCTGGGA 190562 || ||||| |||||||| || |||||||||||||||||||| ||||| || ||||| || Sbjct 2 GGATTCCACAACTGGACTCTAAACCCCTTCCACATGATGGGAGTTGCGGGAATCCTCGGC 61 Query 190563 GGAGCACTACTGTCAGCAATCCATGGTGTGACTGTAGAGAATACTTTGTATGAAG 190617 || || ||||| | || || ||||||| || ||||| || || ||| ||||| Sbjct 62 GGTGCGCTACTATGTGCTATTCATGGTGCTACAGTAGAAAACACCCTGTTTGAAG 116 >seq3509123 Length=199 Score = 96.9 bits (106), Expect = 4e-15 Identities = 115/154 (75%), Gaps = 4/154 (3%) Strand=Plus/Plus Query 189694 AATGGGTTCAACTTCAATCAATCCATTCTTGATGGTCAAG--GTCGTGTTCTGAACACAT 189751 || || ||||||||||| |||||| | | || || || |||| || | ||||| | Sbjct 1 AACGGTTTCAACTTCAACCAATCCGTAATGGAC--TCCAGCGGTCGGGTAGTTAACACCT 58 Query 189752 GGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCATGAGCGTAACGCTC 189811 |||| || || ||||||| ||| || ||||||||||| ||||| ||||| ||||||| Sbjct 59 GGGCTGATGTCATCAACCGCGCTAACCTGGGTATGGAAGTAATGCACGAGCGCAACGCTC 118 Query 189812 ACAACTTCCCTCTTGATCTGGCAGCAGCAGAGTC 189845 |||||||||| | ||| | || | || ||||| Sbjct 119 ACAACTTCCCCTTAGATTTAGCTTCTGCTGAGTC 152 >seq1238013 Length=100 Score = 86.0 bits (94), Expect = 8e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 18731 GTGGCGGAATTGGTAGACGCGCCAGGTTTAGGTTCTGGTGTCTTTATGACGTGGAGGTTC 18790 |||||||||||||||||||||| || |||||||||| ||||| | |||||| |||||| Sbjct 71 GTGGCGGAATTGGTAGACGCGCTAGATTTAGGTTCTAGTGTCCTCGCGACGTGAAGGTTC 12 Query 18791 AAGTCCT 18797 ||||||| Sbjct 11 AAGTCCT 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 602627396868000