Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq25551 145 3e-32 seq10513 136 2e-29 seq35557 114 5e-23 >seq25551 Length=29834 Score = 145 bits (160), Expect = 3e-32 Identities = 101/115 (88%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||||||||||||||||| || ||| ||||||||| ||||||||||||||| Sbjct 6208 GGACCCGAAAGATGGTGAACTATGCCCGAGCAGGATGAAGCCAGGGGAAACTCTGGTGGA 6149 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || ||||||| ||||| ||||||||||||||| | | |||||| ||||||||| Sbjct 6148 GGTCCGCAGCGATTCTGACGTGCAAATCGATCGCCCGACTTGGGTCTAGGGGCGA 6094 Score = 122 bits (134), Expect = 4e-25 Identities = 119/151 (79%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 33 CTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAA-ATGGGAGGTAAATTTCTTCTAA 91 |||| | |||||| |||||||| ||||||||| |||| | ||| |||||| | | || || Sbjct 7016 CTTCTAGGAGTCGGGTTGTTTGAGAATGCAGCCCTAAGACGGGTGGTAAACTCCATCCAA 6957 Query 92 AGCTAAATATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGC 150 |||||||| | || ||||||||||| |||||||| ||| ||||| ||||||| Sbjct 6956 GGCTAAATACTCAGCACGAGACCGATAGTTCACAAGTACCATGAGGGAAAGTTGAAAAGA 6897 Query 151 ACTTTGGAAAGAGAGTTAAAAAGCACGTGAA 181 |||||| | |||||||| || || ||||||| Sbjct 6896 ACTTTGAAGAGAGAGTTCAATAGGACGTGAA 6866 >seq10513 Length=179133 Score = 136 bits (150), Expect = 2e-29 Identities = 98/113 (87%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 ||| || ||||||||||||||||||| || ||| ||||| |||||||||| |||||||| Sbjct 51767 GGATCCAAAAGATGGTGAACTATGCCCGAGCAGGATGAAGTCAGAGGAAACACTGGTGGA 51826 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 || ||||||| ||||| |||||||||||||| || || |||||||||||||| Sbjct 51827 GGTCCGCAGCGATTCTGACGTGCAAATCGATCATCCAACTTGGGTATAGGGGC 51879 >seq35557 Length=316627 Score = 114 bits (126), Expect = 5e-23 Identities = 78/88 (89%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||||||||||||||||| || ||| ||||||||||||||| ||| ||||| Sbjct 309733 GGACCCGAAAGATGGTGAACTATGCCCGAGCAGGATGAAGCCAGAGGAAAATCTCGTGGA 309792 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATC 656 || ||||||| ||||| |||||||||| Sbjct 309793 GGTCCGCAGCGATTCTGACGTGCAAATC 309820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2078376320800