Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1221 268 1e-69 seq55035 86.0 1e-14 >seq1221 Length=46602 Score = 268 bits (296), Expect = 1e-69 Identities = 212/250 (85%), Gaps = 6/250 (2%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 40697 TCCTTCAGTGTAGCGCGCGTGCGGCCCCGAACATCTAAGGGCATCACAGACCTGTTATTG 40638 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATA 131 | |||| || | | |||| | |||| |||||||||||||||| | | || ||| Sbjct 40637 C-TCAATCTCGCGT-GGCTAAACGCCACTAGTCCCTCTAAGAAGTT-GTCGCCCACCTCG 40581 Query 132 GTCGATGGGGC---TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188 | | ||| || ||||||||| | | || ||||||||||||||||||||||||||| Sbjct 40580 GCGGGTGGCGCAACTATTTAGCAAGCCAGAGTATCGTTCGTTATCGGAATTAACCAGACA 40521 Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248 ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 40520 AATCACTTTACCAACTAAGAACGGCCATGCACCACCACCCACAGAATCAAGAAAGAGCTC 40461 Query 249 TCAATCTGTC 258 |||||||||| Sbjct 40460 TCAATCTGTC 40451 >seq55035 Length=90292 Score = 86.0 bits (94), Expect = 1e-14 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 ||||| ||||||| |||||||||||||||||| ||||||||||||||||||| | ||| | Sbjct 7538 TTAACAAGACAAACCACTCCACCAACTAAGAATGGCCATGCACCACCACCCAAATAATAA 7479 Query 238 AGAAA 242 | ||| Sbjct 7478 AAAAA 7474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796215702576