Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq23541 379 3e-103 seq1221 232 1e-58 seq18692 221 2e-55 seq50680 174 3e-41 seq74553 159 6e-37 seq62757 159 6e-37 seq28493 138 2e-30 seq75071 131 3e-28 seq6966 114 2e-23 seq35453 102 1e-19 seq25125 100 5e-19 seq30650 86.0 1e-14 seq45658 75.2 2e-11 >seq23541 Length=25553 Score = 379 bits (420), Expect = 3e-103 Identities = 243/265 (92%), Gaps = 0/265 (0%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 8729 GTAATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT 8788 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 |||||||||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct 8789 ATTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCG 8848 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8849 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 8908 Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAG 269 |||||||||||||||||| ||||||| || ||||| | ||| | ||||||||| ||| Sbjct 8909 CCTGTGGTAACTTTTCTGACACCTCTTGCTTCAAACTCCGAAAATCAAAAGGATCGTTAG 8968 Query 270 GCCACACTTTCATGGTTTGTATTCA 294 ||||| |||||| ||| |||||||| Sbjct 8969 GCCACGCTTTCACGGTCTGTATTCA 8993 >seq1221 Length=46602 Score = 232 bits (256), Expect = 1e-58 Identities = 172/201 (86%), Gaps = 5/201 (2%) Strand=Plus/Minus Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 |||||||||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct 28111 ATTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCG 28052 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct 28051 ACATCGAAGGATCAAAAAGCAATGTCGCTATGAACACTTGGCTGCCACAAGCCAGTTATC 27992 Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCA-----AATTTCGAGGGACTAAAGGATC 264 ||||||| |||||||||| || | || || ||| || | ||| | |||||||| Sbjct 27991 CCTGTGGAAACTTTTCTGCCATCACTTGCATCAACATCAACTCCGAAAATCAAAAGGATC 27932 Query 265 GATAGGCCACACTTTCATGGT 285 | |||||||| |||||| ||| Sbjct 27931 GTTAGGCCACGCTTTCACGGT 27911 >seq18692 Length=32840 Score = 221 bits (244), Expect = 2e-55 Identities = 134/142 (94%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 10792 GTAATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT 10851 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 |||||||||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct 10852 ATTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCG 10911 Query 150 ACATCGAAGGATCAAAAAGCAA 171 |||||||||||||||||||||| Sbjct 10912 ACATCGAAGGATCAAAAAGCAA 10933 >seq50680 Length=97443 Score = 174 bits (192), Expect = 3e-41 Identities = 116/128 (91%), Gaps = 1/128 (1%) Strand=Plus/Minus Query 48 CTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATC 107 |||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 36904 CTAATCTGTCTCACGACGGTCTAAACGCAGCTCACGTTCCCTATTAGTGGGTGAACAATC 36845 Query 108 CAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAA 167 ||||||| |||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct 36844 GAACGCTTGGTGAATTCTGCTTCATAATGATAGGAAGAGCCGACATTGAAGGATCAAAAA 36785 Query 168 GCAACGTC 175 ||||||| Sbjct 36784 -CAACGTC 36778 >seq74553 Length=178424 Score = 159 bits (176), Expect = 6e-37 Identities = 111/126 (88%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 63 ACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAAT 122 ||||||||||||||| ||| | ||||||||||||| |||||||||||| |||| ||| Sbjct 115142 ACGGTCTAAACCCAGTTCAAGCTCCCTATTAGTGGTTGAACAATCCAATGCTTGGTTAAT 115201 Query 123 TCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGA 182 |||||||| ||||||||| ||||||||||||| |||| |||||||||||||||||||| Sbjct 115202 TCTGCTTCACAATGATAGGAGGAGCCGACATCGAGGGATAAAAAAGCAACGTCGCTATGA 115261 Query 183 ACGCTT 188 |||||| Sbjct 115262 ACGCTT 115267 >seq62757 Length=75213 Score = 159 bits (176), Expect = 6e-37 Identities = 97/103 (94%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct 46927 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGA 46986 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG 193 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 46987 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG 47029 >seq28493 Length=47246 Score = 138 bits (152), Expect = 2e-30 Identities = 106/126 (84%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 165 AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 20038 AAAGCAACATCGCCATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 19979 Query 225 CTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGG 284 || |||||||||| | ||| | | | ||| ||||| |||||||| |||||| || Sbjct 19978 GTGACACCTCTAGCTTAAAACTCCAAAAATAAAAAAGATCGGTAGGCCACGCTTTCACGG 19919 Query 285 TTTGTA 290 | |||| Sbjct 19918 TCTGTA 19913 >seq75071 Length=84904 Score = 131 bits (144), Expect = 3e-28 Identities = 107/129 (83%), Gaps = 1/129 (1%) Strand=Plus/Minus Query 164 AAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTT 223 |||| |||| ||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct 29063 AAAATCAACATCGCTATCAACACTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTT 29004 Query 224 TCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATG 283 || | | |||| || ||||| | | | | ||||||||| |||| ||||||||||| Sbjct 29003 TCAGAC-TCTCTTGCTTCAAACTCCAAAAATCGAAAGGATCGTTAGGTTACACTTTCATG 28945 Query 284 GTTTGTATT 292 || |||||| Sbjct 28944 GTCTGTATT 28936 >seq6966 Length=138996 Score = 114 bits (126), Expect = 2e-23 Identities = 71/76 (93%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 39 AGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGG 98 || ||||||||||||||||| | |||||||||| ||||| |||||||||||||||||||| Sbjct 70178 AGCGTAAAACTAACCTGTCTGAAGACGGTCTAATCCCAGGTCACGTTCCCTATTAGTGGG 70119 Query 99 TGAACAATCCAACGCT 114 |||||||||||||||| Sbjct 70118 TGAACAATCCAACGCT 70103 >seq35453 Length=50729 Score = 102 bits (112), Expect = 1e-19 Identities = 104/133 (78%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 163 AAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTT 222 ||||||||| ||||||||||||||| |||| ||||||||| |||| |||| |||| || Sbjct 43271 AAAAAGCAATGTCGCTATGAACGCTGAGCTGTCACAAGCCAATTATTTCTGTAGTAATTT 43212 Query 223 TTCTGGCACCTCTAGCCTCAAATTTCGAGGGACT-AAAGGATCGATAGGCCACACTTTCA 281 ||||| ||||||||||||||| || | | |||| ||| ||||||| || |||| Sbjct 43211 TTCTGTTGTCTCTAGCCTCAAATTCTGAAAAAGTAAAAGAATCATTAGGCCATAC-TTCA 43153 Query 282 TGGTTTGTATTCA 294 | |||||||| Sbjct 43152 CAGCCTGTATTCA 43140 >seq25125 Length=171239 Score = 100 bits (110), Expect = 5e-19 Identities = 64/70 (91%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 55 GTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCT 114 |||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||| Sbjct 165247 GTCTCACGACGGTCTAATCCCAGCTCACGTTCCTTATTAGTGGGTGAACAATCCAACGCT 165306 Query 115 TACCGAATTC 124 | |||||| Sbjct 165307 TGGTGAATTC 165316 >seq30650 Length=30676 Score = 86.0 bits (94), Expect = 1e-14 Identities = 85/109 (78%), Gaps = 1/109 (1%) Strand=Plus/Minus Query 99 TGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAG 158 |||| |||||| | |||| | ||||||| | |||||||||| ||| ||||| ||| Sbjct 14122 TGAAAAATCCACCACTTAGTAACTTCTGCTCCACATTGATAGGAAGGGCCAACATCAAAG 14063 Query 159 GATCA-AAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206 ||||| |||| ||||||| |||||||||||| | ||| | ||| || || Sbjct 14062 GATCAAAAAATCAACGTCACTATGAACGCTTTGTTGCTAGAAGACATTT 14014 >seq45658 Length=50104 Score = 75.2 bits (82), Expect = 2e-11 Identities = 63/78 (81%), Gaps = 7/78 (9%) Strand=Plus/Plus Query 45 AAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACA 104 ||||||||| |||||| |||||||||||||| ||| ||||||| |||||||| Sbjct 43300 AAACTAACCAGTCTCACGACGGTCTAAACCCTGCT-------ATTATTAGTAGGTGAACA 43352 Query 105 ATCCAACGCTTACCGAAT 122 ||||||||||| | |||| Sbjct 43353 ATCCAACGCTTGCTGAAT 43370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853753253376