Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1221 116 7e-24 seq75676 109 1e-21 seq74473 82.4 1e-13 >seq1221 Length=46602 Score = 116 bits (128), Expect = 7e-24 Identities = 88/100 (88%), Gaps = 3/100 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||||| ||| | |||| | | || ||||| |||||||||||||||| Sbjct 40596 CTTCTTAGAGGGACTAGTGGCGTTTAGCC-ACGCGAGATTGAG-CAATAACAGGTCTGTG 40653 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 |||||||||||||||| ||||||||||||||||||||||| Sbjct 40654 ATGCCCTTAGATGTTCGGGGCCGCACGCGCGCTACACTGA 40693 >seq75676 Length=89664 Score = 109 bits (120), Expect = 1e-21 Identities = 77/88 (88%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 241 TAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCA 300 ||| | |||| ||||||| | ||| |||||||||| || |||||||||| ||||||||| Sbjct 59377 TAGGGAATTGTAATTATTTCCCTTGAACGAGGAATTCCCAGTAAGCGCGAGTCATCAGCT 59318 Query 301 CGCGTTGATTACGTCCCTGCCCTTTGTA 328 | |||||||||||||||||||||||||| Sbjct 59317 CACGTTGATTACGTCCCTGCCCTTTGTA 59290 >seq74473 Length=64677 Score = 82.4 bits (90), Expect = 1e-13 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 261 TCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGC 320 |||| || || |||| | |||||||| | ||||||||| |||||||||||||||||||| Sbjct 2673 TCTTGAAGGAAGAATTTCCAGTAAGCGTGAGTCATCAGCTCGCGTTGATTACGTCCCTGC 2614 Query 321 CCTTTGTA 328 |||||||| Sbjct 2613 CCTTTGTA 2606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946483007488