Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orbicella_20faveolata_20[refseq_20GCF_5F002042975.1_202017-03-20] 1,933 sequences; 485,548,939 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq1703 75.2 3e-11 seq1003 75.2 3e-11 >seq1703 Length=9745 Score = 75.2 bits (82), Expect = 3e-11 Identities = 78/101 (77%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | || ||| |||| | | || | |||||||| |||||||||||||| Sbjct 9737 ACGGTTTCACGTACTTTTTAACTCTCTTTTCAAAG-TTCTTTTCATCTTTCCCTCACGGT 9679 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 |||||||| ||||||||| | |||||||||| || || Sbjct 9678 ACTAGTTCGCTATCGGTCTCACGCCAGTATTTAGCTTTAGA 9638 >seq1003 Length=9000 Score = 75.2 bits (82), Expect = 3e-11 Identities = 76/98 (78%), Gaps = 1/98 (1%) Strand=Plus/Minus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | || ||| |||| ||| || | |||||||| |||||||||||||| Sbjct 97 ACGGTTTCACGTACTTTTTAACTCTCCTTTCAAAG-TTCTTTTCATCTTTCCCTCACGGT 39 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTT 367 ||| |||| ||||||||| | |||||||||| || Sbjct 38 ACTTGTTCGCTATCGGTCTCACGCCAGTATTTAGCTTT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241575999872