Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2718 154 6e-35 >seq2718 Length=47833 Score = 154 bits (170), Expect = 6e-35 Identities = 103/115 (90%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||||||||||||||||| || ||| |||||||||||||||||||||||| Sbjct 38904 GGACCCGAAAGATGGTGAACTATGCCCGAGCAGGACGAAGCCAGAGGAAACTCTGGTGGA 38963 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || ||||||| ||||| ||||||||||||||||| | |||||||||||||||| Sbjct 38964 GGTCCGCAGCGATTCTGACGTGCAAATCGATCGTCCGACTTGGGTATAGGGGCGA 39018 Score = 105 bits (116), Expect = 3e-20 Identities = 110/143 (77%), Gaps = 1/143 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAAT-GGGAGGTAAATTTCTTCTAAAGCTAAA 98 |||||| ||||||| | | ||||| | || ||| |||||| | | || || |||||| Sbjct 38090 GAGTCGGGTTGTTTTGTAGCGCAGCCCAAAGGCGGGTGGTAAACTCCATCCAAGGCTAAA 38149 Query 99 TATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 || || ||||||||||| ||||||||| |||| ||||| ||||||||||| || | Sbjct 38150 TACCTGCACGAGACCGATAGAGCACAAGTACCGTGAGGGAAAGTTGAAAAGCACTCTGAA 38209 Query 159 AAGAGAGTTAAAAAGCACGTGAA 181 |||||||| || || ||||||| Sbjct 38210 GAGAGAGTTCAAGAGTACGTGAA 38232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2078709074650