Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq57874 219 8e-55 seq57296 154 3e-35 seq57503 152 1e-34 seq57542 149 1e-33 seq57504 109 1e-21 >seq57874 Length=325 Score = 219 bits (242), Expect = 8e-55 Identities = 154/176 (88%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||||| ||| | |||| |||| |||||| | || || ||||||||||||||||||||| Sbjct 109 GGCGTTGCTCCGTCAGACTTTCGTCCATTGCGGAAGATTCCCCACTGCTGCCTCCCGTAG 168 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||| ||||||||||||||||||||||||||||||||| |||||||| |||||||| ||| Sbjct 169 GAGTTTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCATCCTCTCAGACCGGCTACTGAT 228 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCT 176 | ||| |||||||||| |||| ||||||||||| |||||||| |||||| |||||| Sbjct 229 CATCGCCTTGGTGGGCCATTACCTCACCAACTAGCTAATCGGACGCGAGGCCATCT 284 >seq57296 Length=560 Score = 154 bits (170), Expect = 3e-35 Identities = 87/88 (99%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 473 GGCGTTGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 532 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATG 88 |||||||||||||||||||||||||||| Sbjct 533 GAGTCTGGGCCGTGTCTCAGTCCCAATG 560 >seq57503 Length=406 Score = 152 bits (168), Expect = 1e-34 Identities = 89/92 (97%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||| Sbjct 315 GGCGTCGCTGCATCAGAGTTTCCTCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAG 374 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGC 92 |||||||||||||||||||||||||||||||| Sbjct 375 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGC 406 >seq57542 Length=394 Score = 149 bits (164), Expect = 1e-33 Identities = 84/85 (99%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 310 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAG 369 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCA 85 ||||||||||||||||||||||||| Sbjct 370 GAGTCTGGGCCGTGTCTCAGTCCCA 394 >seq57504 Length=408 Score = 109 bits (120), Expect = 1e-21 Identities = 75/85 (88%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||||| |||| ||||| || | ||||||| |||||| ||||||||||||||||||||| Sbjct 324 GGCGTTGCTGGGTCAGGCTTGCGCCCATTGCCCAATATTCCCCACTGCTGCCTCCCGTAG 383 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCA 85 ||||||||||||| ||||||||||| Sbjct 384 GAGTCTGGGCCGTATCTCAGTCCCA 408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 997799132928