Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq2718 78.8 1e-12 seq155 78.8 1e-12 seq51424 73.4 5e-11 >seq2718 Length=47833 Score = 78.8 bits (86), Expect = 1e-12 Identities = 80/102 (78%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||| ||||| || | ||||||||| ||||||||||||| | | | |||| Sbjct 46218 AAACCAACGCAATAGAACCG-AGGTCCTATTCCATTATTCCATGCTCTGCTGTCCAGGCG 46160 Query 70 -TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | ||||||||||||||||| |||||| |||| ||||| || Sbjct 46159 GTCGGCCTGCTTTGAACACTCCAATTTTTTCAAAGTAAACGT 46118 >seq155 Length=168712 Score = 78.8 bits (86), Expect = 1e-12 Identities = 80/102 (78%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||| ||||| || | ||||||||| ||||||||||||| | | | |||| Sbjct 131506 AAACCAACGCAATAGAACCG-AGGTCCTATTCCATTATTCCATGCTCTGCTGTCCAGGCG 131448 Query 70 -TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | ||||||||||||||||| |||||| |||| ||||| || Sbjct 131447 GTCGGCCTGCTTTGAACACTCCAATTTTTTCAAAGTAAACGT 131406 >seq51424 Length=480 Score = 73.4 bits (80), Expect = 5e-11 Identities = 78/101 (77%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || ||||||||| |||||||| ||| |||| | |||| Sbjct 288 AAACCAACAAAATAGAACCGACGGTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 347 Query 70 ---TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||| ||||||||||||| |||| ||||| Sbjct 348 GCTCGGGCCTGCTTTG-ACACTCTAATTTTTTCAAAGTAAA 387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594852984822