Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq57874 219 1e-54 seq57542 159 8e-37 seq57504 156 1e-35 seq57296 156 1e-35 seq57503 143 7e-32 seq57614 77.0 8e-12 seq57414 75.2 3e-11 >seq57874 Length=325 Score = 219 bits (242), Expect = 1e-54 Identities = 163/191 (85%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 ||||||| |||||| ||||| ||| |||||||| | ||| | |||| ||| || ||||| Sbjct 78 TTTACAATCCGAAGACCTTCATCACTCACGCGGCGTTGCTCCGTCAGACTTTCGTCCATT 137 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || |||||||||||||||||||||||||||| ||| |||||||||||| ||| ||| Sbjct 138 GCGGAAGATTCCCCACTGCTGCCTCCCGTAGGAGTTTGGGCCGTGTCTCAGTCCCAATGT 197 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||| | ||||||||||||||| |||| |||| |||||| |||||||||||||| | ||| Sbjct 198 GGCCGTTCATCCTCTCAGACCGGCTACTGATCATCGCCTTGGTGGGCCATTACCTCACCA 257 Query 185 ACTAGCTAATC 195 ||||||||||| Sbjct 258 ACTAGCTAATC 268 >seq57542 Length=394 Score = 159 bits (176), Expect = 8e-37 Identities = 105/116 (91%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 ||||||| |||||| |||||||| | |||||||| | ||||||||||| || | |||||| Sbjct 279 TTTACAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGCTGCATCAGGGTTTCCCCCATT 338 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 120 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct 339 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCA 394 >seq57504 Length=408 Score = 156 bits (172), Expect = 1e-35 Identities = 104/116 (90%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 ||||||||||||| ||||||||| | |||||||| | |||| ||||||||||||||||| Sbjct 293 TTTACAACCCGAAAGCCTTCTTCCTTCACGCGGCGTTGCTGGGTCAGGCTTGCGCCCATT 352 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 120 | |||||||||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct 353 GCCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTATCTCAGTCCCA 408 >seq57296 Length=560 Score = 156 bits (172), Expect = 1e-35 Identities = 106/119 (89%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 ||||||| |||||| |||||||| | |||||||| | ||||||||||| || | |||||| Sbjct 442 TTTACAATCCGAAGACCTTCTTCCTTCACGCGGCGTTGCTGCATCAGGGTTTCCCCCATT 501 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 ||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||| || Sbjct 502 GTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATG 560 >seq57503 Length=406 Score = 143 bits (158), Expect = 7e-32 Identities = 106/124 (85%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 ||||||| |||| |||||||| |||||||| | |||||||||| || | |||| Sbjct 283 CTTTACATAGCGAACTACTTCTTCACTCACGCGGCGTCGCTGCATCAGAGTTTCCTCCAT 342 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| || Sbjct 343 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATG 402 Query 124 TGGC 127 |||| Sbjct 403 TGGC 406 >seq57614 Length=372 Score = 77.0 bits (84), Expect = 8e-12 Identities = 68/85 (80%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 2 TACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCC 61 || ||||||| ||||| |||||||| || ||||||| | |||| |||| || | || Sbjct 288 TAGTTTACAATCCGAAAACCTTCTTCCTATACGCGGCGTCACTGCGTCAGAGTTTCCTCC 347 Query 62 ATTGTGCAATATTCCCCACTGCTGC 86 |||| ||||||||||| |||||||| Sbjct 348 ATTGCGCAATATTCCCGACTGCTGC 372 >seq57414 Length=448 Score = 75.2 bits (82), Expect = 3e-11 Identities = 43/44 (98%), Gaps = 0/44 (0%) Strand=Plus/Plus Query 3 ACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGC 46 ||||||||||||||||||||||||||| |||||||||||||||| Sbjct 405 ACTTTACAACCCGAAGGCCTTCTTCATTCACGCGGCATGGCTGC 448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1221664323008