Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2718 251 1e-64 >seq2718 Length=47833 Score = 251 bits (278), Expect = 1e-64 Identities = 246/312 (79%), Gaps = 5/312 (2%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCG--GGTCGCCGGCTTCTT 77 || |||||| | | |||||||||| | ||| || ||| || ||| | |||||| Sbjct 46702 GAACGAGACTCTGGCTTGCTAAATAGTCGCGCCGGCCGCCGCGCCGGGCGCTGACTTCTT 46761 Query 78 AGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC 136 |||||||| | ||| | |||| | | || ||||| |||||||||||||||||||||| Sbjct 46762 AGAGGGACAAGTGGCGTTCAGCC-ACGCGAGATTGAG-CAATAACAGGTCTGTGATGCCC 46819 Query 137 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGG 196 |||||||| | ||||||||||||||||||||||| | | || || || | |||||| Sbjct 46820 TTAGATGTCCGGGGCCGCACGCGCGCTACACTGAAGGGGTCAGCGGGTCCCGTCCCTTGG 46879 Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256 |||||||||||||| |||| | || | | ||||||| ||||||| | |||||||| Sbjct 46880 CCGGAAGGTCTGGGCAATCCGTTGAACCCCCTTCGTGCTTGGGATAGGGAGTTGCAATTG 46939 Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316 | | ||| |||||||||| || |||||||||| ||||||||| |||||||||||||||| Sbjct 46940 TCTCCCTTAAACGAGGAATTCCCAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCC 46999 Query 317 CTGCCCTTTGTA 328 |||||||||||| Sbjct 47000 CTGCCCTTTGTA 47011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946629946624