Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq617 520 3e-145 seq8123 253 7e-65 seq14444 241 4e-61 seq2423 129 2e-27 seq6384 123 8e-26 seq22132 105 2e-20 >seq617 Length=136390 Score = 520 bits (576), Expect = 3e-145 Identities = 424/513 (83%), Gaps = 36/513 (7%) Strand=Plus/Plus Query 51 GGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAAT 110 |||||||||||||| ||| |||||||| ||||||||| |||||||||| |||||| | Sbjct 128687 GGACACCTGCGTTACCATTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACGCT 128746 Query 111 GTCATCAACCCGGATCG--------GC-CCGCGAAG-------GACCTTAACGCCAGAAA 154 ||| || ||| ||| || |||||| | | |||| |||||||| Sbjct 128747 GTCGTCGGAGCGGGTCGCGCCCGACGCGCCGCGAGGCGGCCGGGCGCTTAGCGCCAGAAG 128806 Query 155 A-TGGTCG---GTGAAGACCAGTTCC-GCTTCATTGATTAAGTaaaaaaaCGATAAGGGT 209 | ||| | | | | || |||| || ||| || |||||||| | |||| || || Sbjct 128807 ACTGGGCCCGCGCGGGGCCCGCTTCCCGCCTCACCGAATAAGTAAAGAGACGACGAGAGT 128866 Query 210 AGTGGTATTTCACTTGCGCCGAAACGG------------CTCCCACTTATTCTACACCTC 257 ||||||||||||| || || |||| ||||||| ||| ||||||| | Sbjct 128867 AGTGGTATTTCAC---CGTCGGCACGGGGCGGGCCCGGCCTCCCACCTATCCTACACCCC 128923 Query 258 TCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTG 317 | ||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct 128924 CCGTGTCTCTTCACAAGGTCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTG 128983 Query 318 ATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGG 377 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 128984 ATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGG 129043 Query 378 AATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTA 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 129044 AATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTA 129103 Query 438 AGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACA 497 ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 129104 AGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCGCTGAATTTCTTCACTTTGACA 129163 Query 498 TTCAGAGCACTGGGCAGAAATCACATTGCGTCA 530 ||||||||||||||||||||||||||||||||| Sbjct 129164 TTCAGAGCACTGGGCAGAAATCACATTGCGTCA 129196 >seq8123 Length=40503 Score = 253 bits (280), Expect = 7e-65 Identities = 154/163 (94%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 270 ACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGC 329 |||| || ||||||||||||||||||||| ||||||||||||||||||||| |||| || Sbjct 20731 ACAAGATCAGACTAGAGTCAAGCTCAACAGAGTCTTCTTTCCCCGCTGATTCTGCCAGGC 20672 Query 330 CCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAAT 389 |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct 20671 CCGTTCCCTTGGCTGTAGTTTCGCTAGATAGTAGATAGGGGCAGTGGGAATCTCGTTAAT 20612 Query 390 CCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 ||||||||||||||||| ||||||||||||||||||||||||| Sbjct 20611 CCATTCATGCGCGTCACCAATTAGATGACGAGGCATTTGGCTA 20569 >seq14444 Length=22526 Score = 241 bits (266), Expect = 4e-61 Identities = 151/163 (93%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 270 ACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGC 329 |||| || ||||||||||||||||||||| ||||||||||||||||||||| |||| || Sbjct 7417 ACAAGATCAGACTAGAGTCAAGCTCAACAGAGTCTTCTTTCCCCGCTGATTCTGCCAGGC 7476 Query 330 CCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAAT 389 ||||||| |||||||| ||||||||||||||||||||||| |||| |||||||||||||| Sbjct 7477 CCGTTCCTTTGGCTGTAGTTTCGCTAGATAGTAGATAGGGGCAGTTGGAATCTCGTTAAT 7536 Query 390 CCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 ||||||| |||||||||||||||||||||||||||||||| || Sbjct 7537 CCATTCAAGCGCGTCACTAATTAGATGACGAGGCATTTGGATA 7579 >seq2423 Length=102718 Score = 129 bits (142), Expect = 2e-27 Identities = 76/79 (96%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 265 ATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGC 324 ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| || Sbjct 27395 ATTTCACAAGGTCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGC 27336 Query 325 CAAGCCCGTTCCCTTGGCT 343 ||||||||||||||||||| Sbjct 27335 CAAGCCCGTTCCCTTGGCT 27317 >seq6384 Length=36722 Score = 123 bits (136), Expect = 8e-26 Identities = 73/76 (96%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14199 ATTGTAGATAAGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 14258 Query 417 ACGAGGCATTTGGCTA 432 |||||| ||||||||| Sbjct 14259 ACGAGGTATTTGGCTA 14274 >seq22132 Length=804 Score = 105 bits (116), Expect = 2e-20 Identities = 58/58 (100%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 747 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634215887584