Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq57874 168 1e-39 seq57504 143 6e-32 seq57296 132 1e-28 seq57355 127 4e-27 seq57542 118 2e-24 seq57503 114 3e-23 seq59589 113 1e-22 seq58481 107 4e-21 seq57335 95.1 3e-17 seq57756 93.3 9e-17 seq57328 82.4 2e-13 seq59811 80.6 6e-13 seq58376 80.6 6e-13 seq59853 78.8 2e-12 seq57377 77.0 7e-12 seq59233 73.4 8e-11 >seq57874 Length=325 Score = 168 bits (186), Expect = 1e-39 Identities = 157/198 (79%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 89 TTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCAT 148 ||||||||||| ||| |||||||| |||||| | | ||| ||||||| |||||||| Sbjct 78 TTTACAATCCGAAGA-CCTTCATCACTCACGCGGCGTTGCTCCGTCAGACTTTCGTCCAT 136 Query 149 TGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATG 208 || || ||||| |||||||||||||||||||||||||| |||||||||||| |||||| Sbjct 137 TGCGGAAGATTCCCCACTGCTGCCTCCCGTAGGAGTTTGGGCCGTGTCTCAGTCCCAATG 196 Query 209 TGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCC 268 ||| | | |||||||||| | ||| ||| | | || |||||||| ||||| | || Sbjct 197 TGGCCGTTCATCCTCTCAGACCGGCTACTGATCATCGCCTTGGTGGGCCATTACCTCACC 256 Query 269 TACTACCTAATGGAACGC 286 |||| ||||| | |||| Sbjct 257 AACTAGCTAATCGGACGC 274 >seq57504 Length=408 Score = 143 bits (158), Expect = 6e-32 Identities = 154/205 (75%), Gaps = 18/205 (9%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||| ||||||||| |||||||| | |||||| | || | Sbjct 222 GGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCGTCAGGTACCGTCTT-CTGC------- 273 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | |||||| |||||||||||||||| ||| | | ||||| |||||||||| Sbjct 274 ---------TCTTCCCTCTTAAAAGAAGTTTACAACCCGAA-AGCCTTCTTCCTTCACGC 323 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||||| |||| || || |||||| |||||||||| |||||||||||||||||| Sbjct 324 GGCGTTGCTGGGTCAGGCTTGCGCCCATTGCCCAATATTCCCCACTGCTGCCTCCCGTAG 383 Query 181 GAGTTTGGACCGTGTCTCAGTTCCA 205 |||| ||| |||| ||||||| ||| Sbjct 384 GAGTCTGGGCCGTATCTCAGTCCCA 408 >seq57296 Length=560 Score = 132 bits (146), Expect = 1e-28 Identities = 152/208 (73%), Gaps = 20/208 (10%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||| ||||||||| |||| || | |||||| || Sbjct 373 GGCTGCTGGCACGTAGTTAGCCGGAGCTTCCTCCTCAGGTACCGTCA------------- 419 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 || | |||||| | | |||||||||||||||| ||| ||||| |||||||||| Sbjct 420 ------TTATCTTCCCTGAGGACAGAAGTTTACAATCCGAAGA-CCTTCTTCCTTCACGC 472 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | |||| |||| | || |||||| |||||| || |||||||||||||||||| Sbjct 473 GGCGTTGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 532 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATG 208 |||| ||| |||||||||||| |||||| Sbjct 533 GAGTCTGGGCCGTGTCTCAGTCCCAATG 560 >seq57355 Length=496 Score = 127 bits (140), Expect = 4e-27 Identities = 101/120 (84%), Gaps = 1/120 (1%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||||||||||||||||||||||||||| ||||||| || | |||||||| Sbjct 377 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATACGGTACATGCAGGGGGCCACACGT 436 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | | |||||||| ||| ||||||||||||||||| || || ||||||||||||| Sbjct 437 GACCCTTGTTATTCCCGTAT-AAAGAAGTTTACAATCCATAAGACAGTCATCCTTCACGC 495 >seq57542 Length=394 Score = 118 bits (130), Expect = 2e-24 Identities = 102/125 (82%), Gaps = 1/125 (1%) Strand=Plus/Plus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 || || ||||||||||||| ||| ||||| |||| ||||| | | |||| |||| | Sbjct 271 AACAGGAGTTTACAATCCGAAGA-CCTTCTTCCTCCACGCGGCGTCGCTGCATCAGGGTT 329 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 || |||||| ||||||||| |||||||||||||||||||||| ||| ||||||||||| Sbjct 330 TCCCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 389 Query 201 TTCCA 205 | ||| Sbjct 390 TCCCA 394 >seq57503 Length=406 Score = 114 bits (126), Expect = 3e-23 Identities = 150/211 (71%), Gaps = 20/211 (9%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||| ||||||||| |||| || | |||||| || Sbjct 215 GGCTGCTGGCACGTAGTTAGCCGGGGCTTCTTAGTCAGGTACCGTCA------------- 261 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 |||| |||||| | | ||| |||||| || | || ||| || |||||| Sbjct 262 ------TTTTCTTCCCTGCTGATAGAGCTTTACATAGCGAACTAC-TTCTTCACTCACGC 314 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | |||| ||||| | || ||||||| ||||||||| |||||||||||||||||| Sbjct 315 GGCGTCGCTGCATCAGAGTTTCCTCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAG 374 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGG 211 |||| ||| |||||||||||| ||||||||| Sbjct 375 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGG 405 >seq59589 Length=217 Score = 113 bits (124), Expect = 1e-22 Identities = 99/121 (82%), Gaps = 2/121 (2%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||||| ||||||| | |||||||||| ||||||| ||| |||||||| Sbjct 99 GGCTGCTGGCACGGA-TTAGCCGGTCCTTATTCATAGGGTACATGCAAAACTCCACACGT 157 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | | ||||||||| |||||||| ||||||||| || ||| || ||||||| ||||| Sbjct 158 GAAGCACTTTATTCCCCTATAAAAGCAGTTTACAA-CCATAGGGCCGTCATCCTGCACGC 216 Query 121 T 121 | Sbjct 217 T 217 >seq58481 Length=269 Score = 107 bits (118), Expect = 4e-21 Identities = 105/133 (79%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTC-CCACACG 59 ||||||||||||||||||||||||||||| ||| | ||||| | | | ||||||| Sbjct 137 GGCTGCTGGCACGGAGTTAGCCGATGCTTTTTCTTCGGGTACTCTCCTTCCCGCCACACG 196 Query 60 TGGAAGGTTTTATTCCCTTATAAAA-GAAGTTTACAATCCGTAGAACCTTCATCCTTCAC 118 ||| || || |||| | |||| || ||||||||||| ||| ||| |||||| |||| Sbjct 197 TGGCGGGCCTTGCTCCCCGACAAAAAGAGGTTTACAATCCATAGGACCGTCATCCCTCAC 256 Query 119 GCTACTTGGCTGG 131 || |||||||||| Sbjct 257 GCGACTTGGCTGG 269 >seq57335 Length=512 Score = 95.1 bits (104), Expect = 3e-17 Identities = 112/146 (77%), Gaps = 12/146 (8%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCT-CCCACACG 59 ||||||||||||||||||||||||||||| ||| | ||||| || | ||||||| Sbjct 376 GGCTGCTGGCACGGAGTTAGCCGATGCTTTTTCTTCGGGTACTCTCACTTTAGCCACACG 435 Query 60 TGGAAGGTTTTAT--TCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCA 117 | ||| |||| |||| | || | |||||| |||| ||| ||| || ||| ||| Sbjct 436 T----GGTCTTATGCTCCCCGACAA---AGGTTTAC-ATCCATAGGACCGTCTTCC-TCA 486 Query 118 CGCTACTTGGCTGGTTCAGACTCTCG 143 ||| ||||||||||||||| |||||| Sbjct 487 CGCGACTTGGCTGGTTCAGGCTCTCG 512 >seq57756 Length=346 Score = 93.3 bits (102), Expect = 9e-17 Identities = 105/137 (77%), Gaps = 4/137 (3%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACA-TACAAGCTCCCACACG 59 ||||||||||||||||||||||||||||| ||| |||||| | | | ||||||| Sbjct 211 GGCTGCTGGCACGGAGTTAGCCGATGCTT-TTCTCCAGGTACTCTCCTTCCGTCCACACG 269 Query 60 TGGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACG 119 |||| | || | || | ||||| |||||| | |||||| |||| ||| ||||| Sbjct 270 TGGACGCATTGCTCCC--TGGCAAAGAGGTTTACGACCCGTAGGGCCTTAGTCCCTCACG 327 Query 120 CTACTTGGCTGGTTCAG 136 | ||||||||||||||| Sbjct 328 CGACTTGGCTGGTTCAG 344 >seq57328 Length=519 Score = 82.4 bits (90), Expect = 2e-13 Identities = 99/127 (78%), Gaps = 7/127 (6%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||||| ||||||| | ||| ||| | ||||||||||| |||||||| Sbjct 398 GGCTGCTGGCACGGA-TTAGCCGGT-CTT-TTCTGATGGTACATACAAAACACCACACGT 454 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGA--ACCTTCATCCTTCAC 118 || | |||||||| |||||| ||||||||| || |||| || || |||| ||| Sbjct 455 GG-TGCACTTATTCCCAACTAAAAGCAGTTTACAA-CCCTAGAGGGCCGTCGTCCTGCAC 512 Query 119 GCTACTT 125 ||||||| Sbjct 513 GCTACTT 519 >seq59811 Length=208 Score = 80.6 bits (88), Expect = 6e-13 Identities = 57/64 (89%), Gaps = 1/64 (2%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||||| ||||||||| |||||||||| ||||||| ||| | |||||||| Sbjct 144 GGCTGCTGGCACGGA-TTAGCCGATCCTTATTCATATGGTACATGCAAAATTCCACACGT 202 Query 61 GGAA 64 |||| Sbjct 203 GGAA 206 >seq58376 Length=269 Score = 80.6 bits (88), Expect = 6e-13 Identities = 103/139 (74%), Gaps = 4/139 (3%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||||||||||||||||||| ||| | ||||||| || | |||||| Sbjct 135 GGCTGCTGGCACGGAGTTAGCCGATGCTTTTTCTTCAGGTACACTCATCCGGGGACACGT 194 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | || ||||| | |||| |||||| || | | |||||| ||| |||||| Sbjct 195 --CCCGCCTTTGTCCCTGA-CAAAGNGGTTTACGATACTCTGTACCTTCCTCCCTCACGC 251 Query 121 TACTTGGCTGGTTCAGACT 139 |||||||||||||| || Sbjct 252 -GCTTGGCTGGTTCAGTCT 269 >seq59853 Length=209 Score = 78.8 bits (86), Expect = 2e-12 Identities = 54/61 (89%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||| Sbjct 144 GGCTGCTGGCACGGAGTTAGCCGATCCTTATTCATACGGTACATACAAAAAGGCACACGT 203 Query 61 G 61 | Sbjct 204 G 204 >seq57377 Length=480 Score = 77.0 bits (84), Expect = 7e-12 Identities = 78/102 (76%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||||||||||||||||||| ||| | ||||| ||| |||||||| Sbjct 379 GGCTGCTGGCACGGAGTTAGCCGATGCTTTTTCTTCGGGTACTCTCAATGAGCCACACGT 438 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAG 102 | ||| |||| | |||||| |||||||| |||||| Sbjct 439 GACTCTCTTTGCTCCCCGACAAAAGAGGTTTACAACCCGTAG 480 >seq59233 Length=231 Score = 73.4 bits (80), Expect = 8e-11 Identities = 45/48 (94%), Gaps = 0/48 (0%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAA 48 ||||||||||||||||||||||||| ||||||||||| |||||| ||| Sbjct 166 GGCTGCTGGCACGGAGTTAGCCGATCCTTATTCATAAAGTACATGCAA 213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068156764096