Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2136 470 4e-130 seq7261 75.2 3e-11 >seq2136 Length=35799 Score = 470 bits (520), Expect = 4e-130 Identities = 388/464 (84%), Gaps = 12/464 (3%) Strand=Plus/Plus Query 51 GTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGT 110 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 264 GTCACTACCTCCCCGTGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGT 323 Query 111 GGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGA 170 ||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||| Sbjct 324 GGTAGCCGTTTCTCAAGCTCCCTCTCCGGAATCGAACCCTGATTCTCCGTTACCCGTTAC 383 Query 171 TACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACC 230 |||||||||||| || | ||||||||||||||||||||||||| ||| ||| || || Sbjct 384 GACCATGGTAGGCGCATAACGTACCATCGAAAGTTGATAGGGCAGACATTCGAAGGATCC 443 Query 231 ATCGCCGGCTCAAGG-CCATGCGATTCGTTAAGTTATTATGA-ATCACCAA-GGAGCCCC 287 ||||||| | ||| || |||||| | | ||||| || ||||||| |||||| Sbjct 444 GTCGCCGGTGCGAGGACCGTGCGATCGGCCAGGTTATCCAGAGTTCACCAACGGAGCCGG 503 Query 288 GAAGGGC----GTTGGTTTTTTATCTAATAAATACACCCCTTCCG--AAGTCGG-GGTTT 340 || | || |||||| || | |||||||| ||| ||| ||| | ||||| | || Sbjct 504 GACGAGCCCGGGTTGGTCTTGTTCCTAATAAAAGCACGCCTCCCGTAAGGTCGGCGCTTG 563 Query 341 TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATA 400 | |||||||||||||||||||||||||| ||||||||||||| | | | | || || Sbjct 564 CTGGCATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAGGAGGATGCGCTCCAAGG 623 Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGA 460 ||| ||||||||||||||||||||| ||||||||| || | || | |||| |||||||| Sbjct 624 AACCATAACTGATTTAATGAGCCATCCGCAGTTTCGCT-TGTA-AAAGCTTTTACTTAGA 681 Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 682 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 725 >seq7261 Length=74876 Score = 75.2 bits (82), Expect = 3e-11 Identities = 65/76 (86%), Gaps = 5/76 (7%) Strand=Plus/Minus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA--AGGTACTATCAAATAA 401 |||||||||||||||||||||||||| ||||||||| ||| | | | ||| || || || Sbjct 36752 GCATGTATTAGCTCTAGAATTACCACAGTTATCCAT-TAGGAGGATGCACT-TCGAA-AA 36696 Query 402 ACGATAACTGATTTAA 417 || ||||||||||||| Sbjct 36695 ACCATAACTGATTTAA 36680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509490995968