Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq937 183 2e-41 seq8469 174 1e-38 seq47842 134 1e-26 seq6406 131 1e-25 seq503 120 2e-22 >seq937 Length=97168 Score = 183 bits (202), Expect = 2e-41 Identities = 220/297 (74%), Gaps = 4/297 (1%) Strand=Plus/Minus Query 61082 AGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCG 61141 |||| || ||| ||||||||| ||||| || || || ||||||||||| |||||||||| Sbjct 94289 AGGACATCTGGGACATGTACAAGAAGGCAGAGGCGTCGTTCTGGACGGTCGAGGAGGTCG 94230 Query 61142 ATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGG--TGAACAACATTTCAT 61199 | | ||||| ||| | ||||||||| | || ||| | ||| || ||||| Sbjct 94229 ACCTCTCCAAGGACCTCCCAGACTGGGAG--TCCCTCAAGCCGGATGAGAGGCACTTCAT 94172 Query 61200 TAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGA 61259 || || ||||| ||||| ||||| ||||| ||||| || ||||| | |||| Sbjct 94171 CTCCCACGTCTTGGCCTTCTTCGCCGCCAGCGACGGCATCGTGAACGAGAACCTCGTGGA 94112 Query 61260 ACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGC 61319 || ||| |||||||| || ||| |||||||||| || |||||||| |||||||| || Sbjct 94111 GCGGTTCAGCCAGGAGGTTCAGGTGCCGGAGGCGCGGTGCTTCTACGGGTTCCAGATCGC 94052 Query 61320 CATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 ||| ||||| | ||||| ||||||||||| | | ||||| || |||||||| || Sbjct 94051 CATCGAGAACATTCACTCAGAGATGTACAGCTTGTTGATCGACACCTACATCAGAGA 93995 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/224 (70%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 61397 TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATT 61456 ||||||||||||| ||||| |||| || |||| ||| || || ||||| | || | Sbjct 93519 TGTTCAATGCCATTGAGACCCTACCTTGCGTCAAGCAGAAGGCTGACTGGGCGCTGAACT 93460 Query 61457 GGATC-ACCAGTACAACGGCTACATTTGGTGA-ACGATTGCTGGCATTTGCGGTGGTCGA 61514 ||||| || | || | | | || | || || | | ||| |||| || || | || || Sbjct 93459 GGATCAACTCGGAC-ATGTCCACCTACGGCGAGAGGGTTG-TGGCCTTCGCTGCTGTGGA 93402 Query 61515 GGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTAT 61574 ||| | || ||| || || || ||| | ||||| ||| ||||||| | ||||| || Sbjct 93401 GGGCATTTTCTTCTCGGGCTCCTTCGCCTCCATCTTCTGGCTGAAGAAGAGGGGACTGAT 93342 Query 61575 GCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGG 61618 || ||| |||| ||| ||||||| |||| ||||| |||| Sbjct 93341 GCACGGCTTGACGTTCTCCAATGAGCTGATCAGTCGCGATGAGG 93298 >seq8469 Length=53876 Score = 174 bits (192), Expect = 1e-38 Identities = 218/297 (73%), Gaps = 4/297 (1%) Strand=Plus/Minus Query 61082 AGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCG 61141 |||| || ||| ||||||||| ||||| || || || ||||||||||| |||||||||| Sbjct 19083 AGGACATCTGGGACATGTACAAGAAGGCAGAGGCGTCGTTCTGGACGGTCGAGGAGGTCG 19024 Query 61142 ATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGT--GAACAACATTTCAT 61199 | | ||||| ||| | ||||||||| | || ||| | || || ||||| Sbjct 19023 ACCTCTCCAAGGACCTCCCAGACTGGGAG--TCCCTCAAGCCGGACGAGAGGCACTTCAT 18966 Query 61200 TAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGA 61259 || || ||||||||||| ||||| ||||| ||||| || ||||| | |||| Sbjct 18965 CTCCCACGTCTTGGCGTTCTTCGCCGCCAGCGACGGCATCGTGAACGAGAACCTCGTGGA 18906 Query 61260 ACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGC 61319 || ||| |||||||| || ||| | |||||||| || |||||||| |||||||| || Sbjct 18905 GCGGTTCAGCCAGGAGGTTCAGGTGCCCGAGGCGCGGTGCTTCTACGGGTTCCAGATCGC 18846 Query 61320 CATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 ||| ||||| | ||||| ||||||||||| | | || || || |||||||| || Sbjct 18845 CATCGAGAACATTCACTCCGAGATGTACAGCTTGTTGATTGACACCTACATCAGAGA 18789 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/224 (70%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 61397 TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATT 61456 ||||||||||||| ||||| |||| || |||| ||| || || ||||| | || | Sbjct 18105 TGTTCAATGCCATTGAGACCCTACCTTGCGTCAAGCAGAAGGCTGACTGGGCGCTGAACT 18046 Query 61457 GGATC-ACCAGTACAACGGCTACATTTGGTGA-ACGATTGCTGGCATTTGCGGTGGTCGA 61514 ||||| || | || | | | || | || || | | ||| |||| || || | || || Sbjct 18045 GGATCAACTCGGAC-ATGCCCACCTACGGCGAGAGGGTTG-TGGCCTTCGCTGCTGTGGA 17988 Query 61515 GGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTAT 61574 ||| | || ||| || || || ||| | ||||| ||| ||||||| | ||||| || Sbjct 17987 GGGCATTTTCTTCTCGGGGTCCTTCGCCTCCATCTTCTGGCTGAAGAAGAGGGGACTGAT 17928 Query 61575 GCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGG 61618 || ||| |||| ||| ||||||| |||| ||||| |||| Sbjct 17927 GCACGGCTTGACGTTCTCCAATGAGCTGATCAGTCGCGATGAGG 17884 >seq47842 Length=15337 Score = 134 bits (148), Expect = 1e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 66262 TTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACC 66321 ||||||||| || |||| | ||| |||| || || |||||||| |||| || Sbjct 10574 TTCACCCCAGCAATCCGACAAGCCTGGGCACTCGTTGGGGCACATCAGGCACCAGTCTTG 10515 Query 66322 ATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCG 66381 | | || || || | ||| || || || ||||||||||| |||||||||| ||||| Sbjct 10514 GTTCCCCTCCACGCGCCTCATGAACAGGTCTGGTATCCAGAGTCCGTAGAAGAGGTCGCG 10455 Query 66382 TGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGC 66441 || || |||||||| ||||||| || || |||| ||||| |||||||||||||| Sbjct 10454 GGCCCGCTGCTCCTCCTTGCCGTGGTTCTTCTTGCAGTCCAGGAAATCAAAGATGTCGGC 10395 Query 66442 ATGCCATGGTTCCAGGTAGATGGCGAA 66468 ||||| || |||||||||||||| || Sbjct 10394 GTGCCAGGGCTCCAGGTAGATGGCAAA 10368 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 67061 GTCTGCTTGTGCATGTTGGAGATGGCGATACGGGCGGCCAGGACACCATAATCGGGATGT 67120 |||| |||||||| ||||||| |||||||||||||| |||| |||||||||||||| Sbjct 5680 GTCTCCTTGTGCAGATTGGAGACTGCGATACGGGCGGCAAGGATTGCATAATCGGGATGT 5621 Query 67121 AGAGTCATCATACTGGCGGCAGTTTCAGCGGCCAAGGTATCAAGTTCAGCGGTAGTCACA 67180 || |||| | ||||| || || || || | ||| || || || | || || || Sbjct 5620 TTGGTTGTCATGGTAGCGGCCGTCTCGGCAGCGAGGGTGTCCAGCTCCACTGTGGTGACG 5561 Query 67181 CCAGGATACAGGCC 67194 || || |||| ||| Sbjct 5560 CCTGGGTACACGCC 5547 >seq6406 Length=55272 Score = 131 bits (144), Expect = 1e-25 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 66262 TTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACC 66321 ||||||||| || |||| | || |||| || || |||||||| |||| || Sbjct 29291 TTCACCCCAGCAATCCGACAAGCCCGGGCACTCGTTGGGGCACATCAGGCACCAGTCTTG 29232 Query 66322 ATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCG 66381 | | || || || | ||| || || || ||||||||||| |||||||||| ||||| Sbjct 29231 GTTCCCCTCCACGCGCCTCATGAACAGGTCTGGTATCCAGAGTCCGTAGAAGAGGTCGCG 29172 Query 66382 TGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGC 66441 || || |||||||| ||||||| || || |||| ||||| |||||||||||||| Sbjct 29171 GGCCCGCTGCTCCTCCTTGCCGTGGTTCTTCTTGCAGTCCAGGAAATCAAAGATGTCGGC 29112 Query 66442 ATGCCATGGTTCCAGGTAGATGGCGAA 66468 ||||| || |||||||||||||| || Sbjct 29111 GTGCCAGGGCTCCAGGTAGATGGCAAA 29085 Score = 118 bits (130), Expect = 8e-22 Identities = 122/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 66034 TATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGT 66093 || |||||| || || ||||||| ||| ||||||||||| ||||| || ||||| Sbjct 30248 TACCTCGTCCGGGCTGGAGTACTCGATAATCTCGGTGCACAGGTTACTACACTTGATGGT 30189 Query 66094 GCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGT 66153 ||| | ||||| || |||||||| | ||||| ||||| ||||||| ||||||||| || Sbjct 30188 GCCAAGGTTCTGCTGGTTACTCTTACTGTTGCAGGCATCTTTGTACAGCATGTACGGGGT 30129 Query 66154 GCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA 66193 |||||||| |||| || | |||||| ||||| ||| Sbjct 30128 ACCGGTCTCTGTCTGGGCCTGCACGATGGCCTGCCAGAGA 30089 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 67061 GTCTGCTTGTGCATGTTGGAGATGGCGATACGGGCGGCCAGGACACCATAATCGGGATGT 67120 |||| |||||||| ||||||| |||||||||||||| |||| |||||||||||||| Sbjct 24718 GTCTCCTTGTGCAGATTGGAGACTGCGATACGGGCGGCAAGGATTGCATAATCGGGATGT 24659 Query 67121 AGAGTCATCATACTGGCGGCAGTTTCAGCGGCCAAGGTATCAAGTTCAGCGGTAGTCACA 67180 || |||| | ||||| || || || || | ||| || || || | || || || Sbjct 24658 TTGGTTGTCATGGTAGCGGCTGTCTCGGCAGCAAGGGTGTCCAGCTCCACCGTGGTGACG 24599 Query 67181 CCAGGATACAGGCC 67194 || || |||| ||| Sbjct 24598 CCTGGGTACACGCC 24585 >seq503 Length=134583 Score = 120 bits (132), Expect = 2e-22 Identities = 206/297 (69%), Gaps = 4/297 (1%) Strand=Plus/Minus Query 61082 AGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCG 61141 ||||||||||| |||||||| || || ||||||| ||||||||||| || || || | Sbjct 11388 AGGATATTTGGTTAATGTACAAGAAAGCAAAAGCTTCATTCTGGACGGTCGAAGAAGTTG 11329 Query 61142 ATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGG--TGAACAACATTTCAT 61199 || | || || ||| | ||||||| | | || ||||| || | | ||||| Sbjct 11328 ATCTCTCGAAGGACCTACCACACTGGGA--ATCTCTCAAGCGGGAGGAGAGAAAATTCAT 11271 Query 61200 TAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGA 61259 || || ||||| ||||| || || ||||| || || || || || | | | Sbjct 11270 CTCTCACGTTTTGGCTTTCTTCGCGGCCAGCGACGGCATTGTAAACGAAAACCTCCTTCA 11211 Query 61260 ACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGC 61319 ||||| | || ||||| || || |||||||| || || ||||| || ||| | | Sbjct 11210 GCGTTTTACTCAAGAGGTTCAGGTACTTGAGGCGCGATGCTTTTACGGGTTTCAGTTCAC 11151 Query 61320 CATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 ||||||||| | |||||||| |||||||| | | ||||| || |||||||| || Sbjct 11150 CATGGAGAACATTCACTCGGAAATGTACAGCTTGTTGATCGACACCTACATCAGAGA 11094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397276391699120