Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq208953 98.7 5e-19 seq338067 86.0 3e-15 seq164822 86.0 3e-15 seq2675099 80.6 1e-13 >seq208953 Length=1628 Score = 98.7 bits (108), Expect = 5e-19 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| || ||| |||| ||| |||| ||||| |||| Sbjct 725 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 666 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| | |||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 665 CATCGCCGGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 609 >seq338067 Length=1351 Score = 86.0 bits (94), Expect = 3e-15 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 51 AACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCG 110 |||||| || |||||| |||||||| ||||| |||| |||||| ||||||||||||||| Sbjct 919 AACATCCGCCAATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCG 978 Query 111 TCTTCGA 117 ||||||| Sbjct 979 TCTTCGA 985 >seq164822 Length=2065 Score = 86.0 bits (94), Expect = 3e-15 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 51 AACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCG 110 ||| || || ||||||||||||||||||||| |||||||||||||| ||||||| ||| Sbjct 248 AACGTCCACCAATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGATGGTATCTAATCA 307 Query 111 TCTTCGA 117 ||||||| Sbjct 308 TCTTCGA 314 >seq2675099 Length=250 Score = 80.6 bits (88), Expect = 1e-13 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||| ||||| ||||| |||| |||||||||||||||||||||| Sbjct 8 GATCCCTAGTCGGCATCGTTTATGGTTAGAACTAGGACGGTATCTGATCGTCTTCGA 64 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 270553144620