Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq444815 226 7e-57 seq366117 223 8e-56 seq1697694 215 1e-53 seq1787166 206 7e-51 seq2408961 134 3e-29 seq2903806 109 1e-21 >seq444815 Length=5597 Score = 226 bits (250), Expect = 7e-57 Identities = 305/419 (73%), Gaps = 8/419 (2%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 ||||||| || | | ||||||||| |||| ||||||||||| | |||||| Sbjct 1543 GCATCTTTACTCGTAATGCAATTTCACCGAGTTCATGGTGGAGACAGTAGGGAAATCGTT 1602 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1603 ACTCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTA 1662 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATC 192 | ||||| ||||||||||| ||||||| | | ||| ||| | || || | Sbjct 1663 TAGTTACCACCGCCGTTTACTGGGGCTTAAGTTCACCGCTACGCATACACTCACAGTTCC 1722 Query 193 AATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAG 252 |||||||||| |||||||||||| |||| || ||||| || ||| || || ||| Sbjct 1723 CCTTAACCTTCCAGCACCGGGCAGGAGTCAGTCCGTATACATCGTCTTACGACTTCGCAC 1782 Query 253 AGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCA---TGAGC 309 | |||||||||| |||||||||| | ||||| ||| || || || | | Sbjct 1783 GGACCTGTGTTTTTGGTAAACAGTCGTTTCCCCCTGGACTCTGCGCCCCTCACCGCCACC 1842 Query 310 TTACGGAGCAAGTCCTTCAC-CCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTT 368 || | | || | || |||| || | |||| |||| ||||||||| | | || Sbjct 1843 ACACCGCACGGGTGCACGACAGCTCA--GGTCCCCCTTATCCCAAAGTTACGGGGGCATT 1900 Query 369 TTGCCTAGTTCCTTC-CCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 ||||| ||||||||| || ||| ||| ||| | ||||| ||||| ||||||| | |||| Sbjct 1901 TTGCCGAGTTCCTTCACCACGA-TTCACTCGATCGCCTCGGTATACTCTACCTATCCAC 1958 >seq366117 Length=3063 Score = 223 bits (246), Expect = 8e-56 Identities = 320/455 (70%), Gaps = 56/455 (12%) Strand=Plus/Plus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| || | |||||||||| | || ||||||||||||||| || | ||||||||| Sbjct 1532 CGCGGGAACCCCGCATCTTCACGGGGAATTCAATTTCACTGAGCCTATGCTGGAGACAGT 1591 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1592 GGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 1651 Query 121 TTAGGACCGTTAT--------------------------TGTTACGGCCGCCGTTTACCG 154 ||||||||||||| ||||||||||||||| Sbjct 1652 TTAGGACCGTTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGCCGCCGTTTACCT 1711 Query 155 GGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGC 214 ||||||| || | ||| || | | | || | ||||||||| |||||||||| Sbjct 1712 GGGCTTC-----AGTTCGACGCTTTCAC-ATCTCCCT---TTAACCTTCAGGCACCGGGC 1762 Query 215 AGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACA 274 |||||||| |||||||||||| || | || |||||| |||||||||| |||||| Sbjct 1763 AGGCGTCAGACCCTATACGTCGCATTGCTGCTTCGCAGAGCCCTGTGTTTTTGCTAAACA 1822 Query 275 GTCGCAGCGGCCTGGTATCTTCGA--CCGGCATGAGCTTACGGAGCAAGTCCTTCACCCT 332 ||||| | ||||| | | | | | | | | |||| || | | || |||| Sbjct 1823 GTCGCTACCCCCTGGCTTGTGCCACTCAGTCCT--GCTTGCGCA--AGGTGAGTCAC--- 1875 Query 333 CACCGGCGCACCTTCTCCCGAAGTTACG-GTGCCTTTTTGCCTAGTTCCTTCCCCCGAGT 391 ||| | ||||||||||| ||| | |||||| ||||||||| | ||| Sbjct 1876 ----------GCTTATTCCGAAGTTACGCGTG-CAATTTGCCGAGTTCCTTCAGCATAGT 1924 Query 392 TCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 |||||||| ||||||||||| ||||||| ||||| Sbjct 1925 TCTCTCAAACGCCTTGGTATGCTCTACCTGACCAC 1959 >seq1697694 Length=128 Score = 215 bits (238), Expect = 1e-53 Identities = 124/127 (98%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 127 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGTGGCC 68 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 67 ATCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 8 Query 127 CCGTTAT 133 ||||||| Sbjct 7 CCGTTAT 1 >seq1787166 Length=133 Score = 206 bits (228), Expect = 7e-51 Identities = 125/132 (95%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct 132 TACACAGCATCTTCACTGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGTGGCC 73 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 72 ATGGTTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 13 Query 127 CCGTTATTGTTA 138 ||||||| |||| Sbjct 12 CCGTTATAGTTA 1 >seq2408961 Length=195 Score = 134 bits (148), Expect = 3e-29 Identities = 83/89 (93%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 338 GCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTC 397 ||| ||||||||||||||||||||| || ||||||||||||||||| ||||||||||||| Sbjct 11 GCGTACCTTCTCCCGAAGTTACGGTACCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTC 70 Query 398 AAGCGCCTTGGTATTCTCTACCCAACCAC 426 |||||||||||||||||||||| ||||| Sbjct 71 AAGCGCCTTGGTATTCTCTACCTGACCAC 99 >seq2903806 Length=412 Score = 109 bits (120), Expect = 1e-21 Identities = 65/68 (96%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 345 CGCGGGTACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 404 Query 61 GCCGCCAT 68 | ||||| Sbjct 405 GTGGCCAT 412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222894577536