Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq1488853 102 5e-20 seq1629567 96.9 2e-18 seq2597751 93.3 2e-17 seq1556697 93.3 2e-17 seq1549126 93.3 2e-17 seq1505314 93.3 2e-17 seq1489641 93.3 2e-17 seq1405978 93.3 2e-17 seq417926 93.3 2e-17 seq272048 91.5 9e-17 seq208953 91.5 9e-17 seq1591960 86.0 4e-15 seq1558805 84.2 1e-14 seq1592528 82.4 4e-14 seq1361727 82.4 4e-14 seq1508013 80.6 2e-13 seq1504372 80.6 2e-13 seq1341501 80.6 2e-13 seq2977255 78.8 5e-13 seq1546781 77.0 2e-12 seq338067 75.2 7e-12 >seq1488853 Length=127 Score = 102 bits (112), Expect = 5e-20 Identities = 71/77 (92%), Gaps = 3/77 (4%) Strand=Plus/Minus Query 48 TCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 ||||||||| ||||| || ||||||||| ||||||||||||||||||||||||||||||| Sbjct 102 TCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGGGTGTACAAAGGGCAGGGAC 45 Query 108 GTAATACAACGCAAGCT 124 ||||| |||||| |||| Sbjct 44 GTAAT-CAACGCGAGCT 29 >seq1629567 Length=127 Score = 96.9 bits (106), Expect = 2e-18 Identities = 70/77 (91%), Gaps = 3/77 (4%) Strand=Plus/Plus Query 48 TCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 ||||||||| ||||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 1 TCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGAC 58 Query 108 GTAATACAACGCAAGCT 124 |||||| ||||| |||| Sbjct 59 GTAATA-AACGCGAGCT 74 >seq2597751 Length=228 Score = 93.3 bits (102), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 3/77 (4%) Strand=Plus/Plus Query 48 TCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 ||||||||| ||||| || ||||||||| || |||||||| ||||||||||||||||||| Sbjct 96 TCTCACTAAACCATT-CAATCGGTAGTA-GCAACGGGCGGTGTGTACAAAGGGCAGGGAC 153 Query 108 GTAATACAACGCAAGCT 124 ||||| |||||| |||| Sbjct 154 GTAAT-CAACGCTAGCT 169 >seq1556697 Length=127 Score = 93.3 bits (102), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 3/77 (4%) Strand=Plus/Plus Query 48 TCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 ||||||||| ||||| || ||||||||| ||||||||||| ||| ||||||||||||||| Sbjct 22 TCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGGACAAAGGGCAGGGAC 79 Query 108 GTAATACAACGCAAGCT 124 ||||| |||||| |||| Sbjct 80 GTAAT-CAACGCGAGCT 95 >seq1549126 Length=127 Score = 93.3 bits (102), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 3/77 (4%) Strand=Plus/Plus Query 48 TCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 ||||||||| ||||| || ||||||||| ||||||||||| |||||||||||| |||||| Sbjct 13 TCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGAAGGGAC 70 Query 108 GTAATACAACGCAAGCT 124 ||||| |||||| |||| Sbjct 71 GTAAT-CAACGCGAGCT 86 >seq1505314 Length=127 Score = 93.3 bits (102), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 3/77 (4%) Strand=Plus/Minus Query 48 TCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 ||||||||| ||||| || ||||||||| ||||||||||| ||||||||||||||||| | Sbjct 120 TCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGCC 63 Query 108 GTAATACAACGCAAGCT 124 ||||| |||||| |||| Sbjct 62 GTAAT-CAACGCGAGCT 47 >seq1489641 Length=127 Score = 93.3 bits (102), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 3/77 (4%) Strand=Plus/Plus Query 48 TCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 ||||||||| ||||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 5 TCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGAC 62 Query 108 GTAATACAACGCAAGCT 124 | ||| |||||| |||| Sbjct 63 GGAAT-CAACGCGAGCT 78 >seq1405978 Length=127 Score = 93.3 bits (102), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 3/77 (4%) Strand=Plus/Minus Query 48 TCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 ||||||||| ||||| || ||||||||| ||||||||||| | ||||||||||||||||| Sbjct 104 TCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGGGTACAAAGGGCAGGGAC 47 Query 108 GTAATACAACGCAAGCT 124 ||||| |||||| |||| Sbjct 46 GTAAT-CAACGCGAGCT 31 >seq417926 Length=443 Score = 93.3 bits (102), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 3/77 (4%) Strand=Plus/Minus Query 48 TCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 ||||||||| ||||| || ||||||||| ||||||||||| |||||||||||| |||||| Sbjct 140 TCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGTAGGGAC 83 Query 108 GTAATACAACGCAAGCT 124 ||||| |||||| |||| Sbjct 82 GTAAT-CAACGCTAGCT 67 >seq272048 Length=1575 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||||||| |||||||||| Sbjct 1153 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 1097 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||||| |||| Sbjct 1096 GGCAGGGACGTAAT-CAACGCGAGCT 1072 >seq208953 Length=1628 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 1420 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 1363 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 1362 TAAT-CAACGCAAGCT 1348 >seq1591960 Length=127 Score = 86.0 bits (94), Expect = 4e-15 Identities = 64/71 (90%), Gaps = 3/71 (4%) Strand=Plus/Minus Query 48 TCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 |||| |||| ||||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 68 TCTCCCTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGAC 11 Query 108 GTAATACAACG 118 ||||| ||||| Sbjct 10 GTAAT-CAACG 1 >seq1558805 Length=127 Score = 84.2 bits (92), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 3/72 (4%) Strand=Plus/Plus Query 53 CTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAAT 112 |||| ||||| || ||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct 1 CTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT 58 Query 113 ACAACGCAAGCT 124 ||||| |||| Sbjct 59 -CAACGAGAGCT 69 >seq1592528 Length=127 Score = 82.4 bits (90), Expect = 4e-14 Identities = 57/62 (92%), Gaps = 2/62 (3%) Strand=Plus/Minus Query 63 TCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAG 122 ||| ||||||||| ||||||||||| |||||||||||||||||||||||| |||||| || Sbjct 127 TCAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAG 70 Query 123 CT 124 || Sbjct 69 CT 68 >seq1361727 Length=127 Score = 82.4 bits (90), Expect = 4e-14 Identities = 57/62 (92%), Gaps = 2/62 (3%) Strand=Plus/Plus Query 48 TCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 ||||||||| ||||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 68 TCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGAC 125 Query 108 GT 109 || Sbjct 126 GT 127 >seq1508013 Length=127 Score = 80.6 bits (88), Expect = 2e-13 Identities = 56/61 (92%), Gaps = 2/61 (3%) Strand=Plus/Plus Query 48 TCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 ||||||||| ||||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 69 TCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGAC 126 Query 108 G 108 | Sbjct 127 G 127 >seq1504372 Length=127 Score = 80.6 bits (88), Expect = 2e-13 Identities = 56/61 (92%), Gaps = 2/61 (3%) Strand=Plus/Plus Query 64 CATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGC 123 || ||||||||| ||||||||||| |||||||||||||||||||||||| |||||| ||| Sbjct 1 CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGC 58 Query 124 T 124 | Sbjct 59 T 59 >seq1341501 Length=127 Score = 80.6 bits (88), Expect = 2e-13 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Plus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 3 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 58 >seq2977255 Length=664 Score = 78.8 bits (86), Expect = 5e-13 Identities = 72/86 (84%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 ||||| | || |||| | ||||| || ||||||| ||||||||||| |||||||||| Sbjct 456 TCCGAGATTT-TCACCGAACCATT-CAATCGGTAGGT-GCGACGGGCGGTGTGTACAAAG 400 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||||| |||| Sbjct 399 GGCAGGGACGTAAT-CAACGCGAGCT 375 >seq1546781 Length=127 Score = 77.0 bits (84), Expect = 2e-12 Identities = 52/56 (93%), Gaps = 2/56 (4%) Strand=Plus/Minus Query 69 GGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 127 GGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 74 >seq338067 Length=1351 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 360 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 417 Query 122 GCT 124 ||| Sbjct 418 GCT 420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 292321788440