Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq164822 113 5e-23 seq2520566 84.2 3e-14 seq1672865 82.4 9e-14 seq208953 82.4 9e-14 seq338067 80.6 3e-13 seq1672864 78.8 1e-12 seq1551689 78.8 1e-12 seq1402038 75.2 1e-11 seq1643389 73.4 5e-11 seq1568175 73.4 5e-11 seq1425208 73.4 5e-11 seq1332014 73.4 5e-11 seq1332013 73.4 5e-11 seq1303226 73.4 5e-11 seq1300009 73.4 5e-11 >seq164822 Length=2065 Score = 113 bits (124), Expect = 5e-23 Identities = 119/152 (78%), Gaps = 6/152 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG--GG 67 ||||||||||||||| || | ||||||| ||||||||||||||||||||||| || Sbjct 461 AAACCAACAAAATAG--ACCAAGGTCCTATCTTATTATTCCATGCTAATGTATTCAACGG 518 Query 68 CGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCAC- 126 | |||||||||||||||||||||| ||| |||| ||||| | | || ||| ||| | Sbjct 519 CCTAAGCCTGCTTTGAACACTCTATTTTGCTCACAGTAAATGACGAGGATCCCGCGCCCG 578 Query 127 ACCAATGAA-GGCATACGGGCTCACCAAGAGG 157 || | |||| | || ||| |||| || |||| Sbjct 579 ACAACTGAATGCCAGACGCGCTCTCCCCGAGG 610 >seq2520566 Length=212 Score = 84.2 bits (92), Expect = 3e-14 Identities = 80/100 (80%), Gaps = 3/100 (3%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||| ||||||||| || | ||||||||| |||||||| ||| |||||| |||| Sbjct 168 AAACCCACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGCGGTATTCAGGCG 110 Query 70 TAAG--CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||||||||||||||||||||||| |||| ||||| Sbjct 109 ACCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 70 >seq1672865 Length=127 Score = 82.4 bits (90), Expect = 9e-14 Identities = 81/102 (79%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||| ||||| || | ||||||||| ||||||||||||| | | | |||| Sbjct 3 AAACCAACGCAATAGAACCG-AGGTCCTATTCCATTATTCCATGCTCTGCTGTCCAGGCG 61 Query 70 -TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 || ||||||||||||||||| |||||| |||| ||||| || Sbjct 62 GTAGGCCTGCTTTGAACACTCCAATTTTTTCAAAGTAAACGT 103 >seq208953 Length=1628 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| ||| ||||||||| |||||||| ||| |||| | |||| Sbjct 461 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 403 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| |||| ||||| Sbjct 402 GCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 362 >seq338067 Length=1351 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 1179 CCAACAGAATAGGATCGAAA-TCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTA 1237 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 1238 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 1275 >seq1672864 Length=127 Score = 78.8 bits (86), Expect = 1e-12 Identities = 80/102 (78%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||| ||||| || | ||||||||| ||||||||||||| | | | |||| Sbjct 3 AAACCAACGCAATAGAACCG-AGGTCCTATTCCATTATTCCATGCTCTGCTGTCCAGGCG 61 Query 70 -TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | ||||||||||||||||| |||||| |||| ||||| || Sbjct 62 GTGGGCCTGCTTTGAACACTCCAATTTTTTCAAAGTAAACGT 103 >seq1551689 Length=127 Score = 78.8 bits (86), Expect = 1e-12 Identities = 80/102 (78%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||| ||||| || | ||||||||| ||||||||||||| | | | |||| Sbjct 14 AAACCAACGCAATAGAACCG-AGGTCCTATTCCATTATTCCATGCTCTGCTTTCCAGGCG 72 Query 70 -TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | ||||||||||||||||| |||||| |||| ||||| || Sbjct 73 GTCGGCCTGCTTTGAACACTCCAATTTTTTCAAAGTAAACGT 114 >seq1402038 Length=127 Score = 75.2 bits (82), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 8/105 (8%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAA--TGT--ATTCG 65 |||||||| ||||| || | ||||||||| ||||||||||||| ||| | || Sbjct 124 AAACCAACGCAATAGAACCG-AGGTCCTATTCCATTATTCCATGCTCTGCTGTCCAGGCG 66 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 |||| ||||||||||||||||| |||||| |||| ||||| || Sbjct 65 GGCG---GCCTGCTTTGAACACTCCAATTTTTTCAAAGTAAACGT 24 >seq1643389 Length=127 Score = 73.4 bits (80), Expect = 5e-11 Identities = 79/102 (77%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||| ||||| || | ||||||||| ||||||||||||| | | | || | Sbjct 7 AAACCAACGCAATAGAACCG-AGGTCCTATTCCATTATTCCATGCTCTGCTGTCCAGGAG 65 Query 70 -TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | ||||||||||||||||| |||||| |||| ||||| || Sbjct 66 GTCGGCCTGCTTTGAACACTCCAATTTTTTCAAAGTAAACGT 107 >seq1568175 Length=127 Score = 73.4 bits (80), Expect = 5e-11 Identities = 79/102 (77%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||| ||||| || | ||||||||| ||||||||||||| | | |||| Sbjct 13 AAACCAACGCAATAGAACCG-AGGTCCTATTCCATTATTCCATGCTCTGCTGGCCAGGCG 71 Query 70 -TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | ||||||||||||||||| |||||| |||| ||||| || Sbjct 72 GTCGGCCTGCTTTGAACACTCCAATTTTTTCAAAGTAAACGT 113 >seq1425208 Length=127 Score = 73.4 bits (80), Expect = 5e-11 Identities = 79/102 (77%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||| ||||| || | ||||||||| ||||||||||| | | | | |||| Sbjct 21 AAACCAACGCAATAGAACCG-AGGTCCTATTCCATTATTCCATGATCTGCTGTCCAGGCG 79 Query 70 -TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | ||||||||||||||||| |||||| |||| ||||| || Sbjct 80 GTCGGCCTGCTTTGAACACTCCAATTTTTTCAAAGTAAACGT 121 >seq1332014 Length=127 Score = 73.4 bits (80), Expect = 5e-11 Identities = 79/102 (77%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||| ||||| || | ||||||||| |||||| |||||| | | | |||| Sbjct 102 AAACCAACGCAATAGAACCG-AGGTCCTATTCCATTATTGCATGCTCTGCTGTCCAGGCG 44 Query 70 -TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | ||||||||||||||||| |||||| |||| ||||| || Sbjct 43 GTCGGCCTGCTTTGAACACTCCAATTTTTTCAAAGTAAACGT 2 >seq1332013 Length=127 Score = 73.4 bits (80), Expect = 5e-11 Identities = 79/102 (77%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||| ||||| || | ||||||||| |||||| |||||| | | | |||| Sbjct 102 AAACCAACGCAATAGAACCG-AGGTCCTATTCCATTATTACATGCTCTGCTGTCCAGGCG 44 Query 70 -TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | ||||||||||||||||| |||||| |||| ||||| || Sbjct 43 GTCGGCCTGCTTTGAACACTCCAATTTTTTCAAAGTAAACGT 2 >seq1303226 Length=127 Score = 73.4 bits (80), Expect = 5e-11 Identities = 79/102 (77%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||| ||||| || | ||||||||| ||||||| ||||| | | | |||| Sbjct 103 AAACCAACGCAATAGAACCG-AGGTCCTATTCCATTATTCAATGCTCTGCTGTCCAGGCG 45 Query 70 -TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | ||||||||||||||||| |||||| |||| ||||| || Sbjct 44 GTCGGCCTGCTTTGAACACTCCAATTTTTTCAAAGTAAACGT 3 >seq1300009 Length=127 Score = 73.4 bits (80), Expect = 5e-11 Identities = 79/102 (77%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||| ||||| || | ||||||||| ||||||||||||| | | | |||| Sbjct 1 AAACCAACGCAATAGAACCG-AGGTCCTATTCCATTATTCCATGCTCTGCTGTCCAGGCG 59 Query 70 TAAG-CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | |||||||||||||||| |||||| |||| ||||| || Sbjct 60 GTCGTCCTGCTTTGAACACTCCAATTTTTTCAAAGTAAACGT 101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577864763172