Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq2792347 114 9e-24 seq2626207 109 4e-22 seq366117 82.4 5e-14 seq2903806 71.6 9e-11 >seq2792347 Length=302 Score = 114 bits (126), Expect = 9e-24 Identities = 96/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| |||||||||||||||||||| | | |||||||||||||||| || Sbjct 125 TACCTTTTATCCTTTGAGCGATGGCCCTTCCATGCGGAACCACCGGATCACTATGCTCTA 66 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| | ||| || | ||| |||| || |||||| | ||| |||||||||||| Sbjct 65 CTTTCGTACCTGATCGACCTGTATGTCTCTCAGTCAAGCTCCCTTATGCCATTGCACT 8 >seq2626207 Length=235 Score = 109 bits (120), Expect = 4e-22 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 ||||||||||||||||||||||||||||||||| || | |||||||||||||||||||| Sbjct 158 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTATGACCTA 217 Query 61 CTTTCGCATCTGCTC 75 |||||| | |||||| Sbjct 218 CTTTCGTACCTGCTC 232 >seq366117 Length=3063 Score = 82.4 bits (90), Expect = 5e-14 Identities = 88/114 (77%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 26 CCTTCCATTCATAGCCACCGGATCACTATGACCTGCTTTCGCATCTGCTCTAGTTGTTGC 85 ||||||| || |||||||||||||||| || |||||| ||||||| | |||| Sbjct 1166 CCTTCCACTCGGGACCACCGGATCACTATGGCCGACTTTCGTCTCTGCTCGACTTGTCAG 1225 Query 86 TCTCGCAATCAAGCACACTTTTGCCATTGCACTATCACTA-CGATTTCCGACCG 138 ||||||| ||| || ||| |||||||||||| || | ||||||||||||| Sbjct 1226 TCTCGCAGTCAGGCGGGCTTATGCCATTGCACT-CGACGACCGATTTCCGACCG 1278 >seq2903806 Length=412 Score = 71.6 bits (78), Expect = 9e-11 Identities = 71/92 (77%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 49 CACTATGACCTGCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTG 108 ||||||||||| |||||| | |||||| | ||| ||||||| | |||| ||| | Sbjct 1 CACTATGACCTACTTTCGTACCTGCTCGACGTGTCTGTCTCGCAGTTAAGCTTGCTTCTA 60 Query 109 CCATTGCACTATCACTACGATTTCCGACCGTA 140 ||||| ||||| | |||||| |||||||||| Sbjct 61 CCATTACACTAACCGTACGATGTCCGACCGTA 92 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 342078688600