Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq164822 150 2e-34 seq2675099 104 2e-20 seq2520566 98.7 1e-18 seq208953 96.9 3e-18 seq272048 91.5 1e-16 seq1672865 82.4 8e-14 seq1643389 82.4 8e-14 seq1551689 82.4 8e-14 seq1402038 80.6 3e-13 seq1672864 78.8 9e-13 seq1425208 78.8 9e-13 seq1332014 73.4 4e-11 seq1332013 73.4 4e-11 seq1303226 73.4 4e-11 seq1300009 73.4 4e-11 >seq164822 Length=2065 Score = 150 bits (166), Expect = 2e-34 Identities = 143/180 (79%), Gaps = 6/180 (3%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGC--TCGAATACATTACCATG 70 |||||| ||| ||| ||||| ||||||||||||| | || | |||||||||| |||| Sbjct 558 TTTACTGTGAGCAAAATAGAGTGTTCAAAGCAGGCTTAGGCCGTTGAATACATTAGCATG 499 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130 |||||||| ||||||| | | |||||||||| ||||| | | |||||||| Sbjct 498 GAATAATAAGATAGGACCTTGG--TCTATTTTGTTGGTTTGCATTCCAAG--GTAATGAT 443 Query 131 AAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 |||| ||||||| |||||| | |||||||||||||| ||||||||||||||||||||| Sbjct 442 TAATAGGGATAGTTGGGGGTATTCGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 383 >seq2675099 Length=250 Score = 104 bits (114), Expect = 2e-20 Identities = 96/119 (81%), Gaps = 2/119 (2%) Strand=Plus/Minus Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130 ||||||| ||||||||| | ||||||||||||| ||||||| | |||| |||||||| Sbjct 250 GAATAATGGAATAGGACTTT-GGTTCTATTTTGTTGGTTTCTGGAACCGAA-GTAATGAT 193 Query 131 AAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 || | ||| ||| ||||| | ||||| |||||| |||||||||||||||||||| Sbjct 192 TAAGAGGGACAGTTGGGGGCATTCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTA 134 >seq2520566 Length=212 Score = 98.7 bits (108), Expect = 1e-18 Identities = 83/100 (83%), Gaps = 3/100 (3%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCATG 70 ||||||||||||||||||||| |||||||||||||| | || |||||| | | | Sbjct 70 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGGTCGCCTGAATACCGCAGCTAG 129 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 ||||||| ||||||||| | |||||||||||||| ||||| Sbjct 130 GAATAATGGAATAGGAC-TCCGGTTCTATTTTGTGGGTTT 168 >seq208953 Length=1628 Score = 96.9 bits (106), Expect = 3e-18 Identities = 129/176 (73%), Gaps = 5/176 (3%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69 ||||||||||||||||||||| |||||||||||||| || | |||| | | Sbjct 362 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 421 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 |||||||| ||||||||| ||||||||||||||| ||||| | ||| | | |||| Sbjct 422 GGAATAATGGAATAGGAC-CGCGGTTCTATTTTGTTGGTTT-TCGGAACTGAGGCCATGA 479 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 | || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 480 TTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGA 535 >seq272048 Length=1575 Score = 91.5 bits (100), Expect = 1e-16 Identities = 93/120 (78%), Gaps = 1/120 (1%) Strand=Plus/Plus Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAA 126 ||||||||||| ||||||||| | |||||||||||||| ||||| | ||| |||| Sbjct 16 CATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTTTCGGAACCCGAGGTAA 74 Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 |||| |||| ||| || |||||| | ||||| || | ||||||||||||||||| Sbjct 75 TGATTAATAGGGACAGGCGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTTGGAT 134 >seq1672865 Length=127 Score = 82.4 bits (90), Expect = 8e-14 Identities = 81/102 (79%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATACATTACCA 68 || ||||||||||||||||| ||| ||||||||||||||| || | | | | || Sbjct 103 ACGTTTACTTTGAAAAAATTGGAGTGTTCAAAGCAGGCCTACCGCCTGGACAGCAGAGCA 44 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 ||||||||| ||||||||| | |||||||||| || ||||| Sbjct 43 TGGAATAATGGAATAGGACCT-CGGTTCTATTGCGTTGGTTT 3 >seq1643389 Length=127 Score = 82.4 bits (90), Expect = 8e-14 Identities = 82/103 (80%), Gaps = 4/103 (4%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACC 67 || ||||||||||||||||| ||| |||||||||||||| | || || || | | Sbjct 107 ACGTTTACTTTGAAAAAATTGGAGTGTTCAAAGCAGGCCGACCTCCTGGACAGCA-GAGC 49 Query 68 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 |||||||||| ||||||||| | |||||||||| || ||||| Sbjct 48 ATGGAATAATGGAATAGGACCT-CGGTTCTATTGCGTTGGTTT 7 >seq1551689 Length=127 Score = 82.4 bits (90), Expect = 8e-14 Identities = 82/103 (80%), Gaps = 4/103 (4%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACC 67 || ||||||||||||||||| ||| |||||||||||||| || ||| || | | Sbjct 114 ACGTTTACTTTGAAAAAATTGGAGTGTTCAAAGCAGGCCGACCGCCTGGAAAGCA-GAGC 56 Query 68 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 |||||||||| ||||||||| | |||||||||| || ||||| Sbjct 55 ATGGAATAATGGAATAGGACCT-CGGTTCTATTGCGTTGGTTT 14 >seq1402038 Length=127 Score = 80.6 bits (88), Expect = 3e-13 Identities = 83/105 (79%), Gaps = 8/105 (8%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAAT--ACA--TTA 65 || ||||||||||||||||| ||| |||||||||||||| || || | ||| | Sbjct 24 ACGTTTACTTTGAAAAAATTGGAGTGTTCAAAGCAGGCC---GCCCGCCTGGACAGCAGA 80 Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 ||||||||||| ||||||||| | |||||||||| || ||||| Sbjct 81 GCATGGAATAATGGAATAGGACCT-CGGTTCTATTGCGTTGGTTT 124 >seq1672864 Length=127 Score = 78.8 bits (86), Expect = 9e-13 Identities = 80/102 (78%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGG-CCTTTGCTCGAATACATTACCA 68 || ||||||||||||||||| ||| |||||||||||| || || | | | | || Sbjct 103 ACGTTTACTTTGAAAAAATTGGAGTGTTCAAAGCAGGCCCACCGCCTGGACAGCAGAGCA 44 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 ||||||||| ||||||||| | |||||||||| || ||||| Sbjct 43 TGGAATAATGGAATAGGACCT-CGGTTCTATTGCGTTGGTTT 3 >seq1425208 Length=127 Score = 78.8 bits (86), Expect = 9e-13 Identities = 80/102 (78%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCA 68 || ||||||||||||||||| ||| |||||||||||||| || | | | | || Sbjct 121 ACGTTTACTTTGAAAAAATTGGAGTGTTCAAAGCAGGCCGACCGCCTGGACAGCAGATCA 62 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 ||||||||| ||||||||| | |||||||||| || ||||| Sbjct 61 TGGAATAATGGAATAGGACCT-CGGTTCTATTGCGTTGGTTT 21 >seq1332014 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 79/102 (77%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCA 68 || ||||||||||||||||| ||| |||||||||||||| || | | | | || Sbjct 2 ACGTTTACTTTGAAAAAATTGGAGTGTTCAAAGCAGGCCGACCGCCTGGACAGCAGAGCA 61 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 || |||||| ||||||||| | |||||||||| || ||||| Sbjct 62 TGCAATAATGGAATAGGACCT-CGGTTCTATTGCGTTGGTTT 102 >seq1332013 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 79/102 (77%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCA 68 || ||||||||||||||||| ||| |||||||||||||| || | | | | || Sbjct 2 ACGTTTACTTTGAAAAAATTGGAGTGTTCAAAGCAGGCCGACCGCCTGGACAGCAGAGCA 61 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 || |||||| ||||||||| | |||||||||| || ||||| Sbjct 62 TGTAATAATGGAATAGGACCT-CGGTTCTATTGCGTTGGTTT 102 >seq1303226 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 79/102 (77%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCA 68 || ||||||||||||||||| ||| |||||||||||||| || | | | | || Sbjct 3 ACGTTTACTTTGAAAAAATTGGAGTGTTCAAAGCAGGCCGACCGCCTGGACAGCAGAGCA 62 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 | ||||||| ||||||||| | |||||||||| || ||||| Sbjct 63 TTGAATAATGGAATAGGACCT-CGGTTCTATTGCGTTGGTTT 103 >seq1300009 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 79/102 (77%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGG-CCTTTGCTCGAATACATTACCA 68 || ||||||||||||||||| ||| |||||||||||| | || | | | | || Sbjct 101 ACGTTTACTTTGAAAAAATTGGAGTGTTCAAAGCAGGACGACCGCCTGGACAGCAGAGCA 42 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 ||||||||| ||||||||| | |||||||||| || ||||| Sbjct 41 TGGAATAATGGAATAGGACCT-CGGTTCTATTGCGTTGGTTT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 497087968320