Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq369036 172 1e-40 seq385221 111 3e-22 seq444815 107 3e-21 >seq369036 Length=1182 Score = 172 bits (190), Expect = 1e-40 Identities = 195/258 (76%), Gaps = 9/258 (3%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| | ||||||||||||||| ||| |||||||||| ||||| | ||| ||||| | Sbjct 541 AGCGCATACGGTGGATGCCTTGGCAATTGGAGGCGATGAAAGACGTTGGAGCCTGCGAAA 482 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| |||||| |||| || ||||||||| |||| || |||||||||||||| | Sbjct 481 AGCTCTGGGGAGGTGGCAACCAACCTTTGATCCAGAGATGTCTGAATGGGGAAACCCACC 422 Query 121 CCT------TTGGGTCATTGCATG-CTGAATACATAGGT-ATGCAAAGCGAACGCGGCGA 172 | | ||| || || |||||||||||||| | | |||||| || || Sbjct 421 TATCATAAGATAGGT-ATCCTTTGACTGAATACATAGGTCTTAGGAGGCGAACCAGGGGA 363 Query 173 ACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCG 232 ||||||||||||||||| | ||||||||||||||| |||||||| | ||||| |||| Sbjct 362 ACTGAAACATCTAAGTACCCTGAGGAAAAGAAATCAAACGAGATTCTCTTAGTAGCGGCG 303 Query 233 AGCGAAATGGGATGAGCC 250 |||||| |||| |||| Sbjct 302 AGCGAACGGGGAACAGCC 285 >seq385221 Length=621 Score = 111 bits (122), Expect = 3e-22 Identities = 139/185 (75%), Gaps = 8/185 (4%) Strand=Plus/Plus Query 138 GCTGAATACATAGGTATGCA--AAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCA 195 |||||||||||||| | || |||||||| ||| |||||||||||||| |||| | | | Sbjct 358 GCTGAATACATAGGCTT-CATTAAGCGAACCCGGGGAACTGAAACATCTCAGTACCCGGA 416 Query 196 GGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGA-GCCTTTA 254 ||||| || ||||||||||| |||| |||||||||||||||| |||| | ||| | Sbjct 417 GGAAAGGACATCAACCGAGACTCCCGTAGTAGTGGCGAGCGAACCGGGACCAGGCCAGT- 475 Query 255 CGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCCATAGCGGGTGATAGCC 314 | | || ||| | || ||| |||||||| ||||||| |||||| |||| Sbjct 476 -GCTCTTGTGAAAT--AAAGACGAACGATCTGGAAAGGTCGGCCATAGTGGGTGAAAGCC 532 Query 315 CCGTA 319 ||||| Sbjct 533 CCGTA 537 >seq444815 Length=5597 Score = 107 bits (118), Expect = 3e-21 Identities = 180/255 (71%), Gaps = 13/255 (5%) Strand=Plus/Minus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||||||||||| | || ||||||||||||| || | |||||||||| ||| Sbjct 3740 GGTGGATGCCTTGGCACCAAGAGCCGATGAAGGACGTTGTGACCTGCGATAAGCCCTGGG 3681 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC----CCT-- 123 |||| | | | || ||||||| | | |||||||||||||||| || || Sbjct 3680 GAGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGAATGGGGAAACCTGGAATGTCCGGA 3621 Query 124 -TTGGGTCAT-TG--CATGC--TGAATACATAGGTATGCAAAGCG-AACGCGGCGAACTG 176 | | ||| || | ||| ||||| ||||| || | ||||||| ||| || Sbjct 3620 GTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTG 3561 Query 177 AAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCG 236 |||||||| |||| | | ||||| ||||| ||| | |||||| |||||||||||||| Sbjct 3560 AAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCG 3501 Query 237 AAATGGGATGAGCCT 251 ||| ||| ||| || Sbjct 3500 AAAGCGGAGGAGGCT 3486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 890788689728