Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinctada_20martensii_20[genbank_20GCA_5F002216045.1_202017-07-20] 5,039 sequences; 990,984,031 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq9 262 6e-68 seq10 259 8e-67 seq1428 84.2 3e-14 >seq9 Length=97764462 Score = 262 bits (290), Expect = 6e-68 Identities = 211/250 (84%), Gaps = 6/250 (2%) Strand=Plus/Plus Query 13 CCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 || |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct 39111447 CCTTCAGTGTAGCGCACGTGCGGCCCCGAACATCTAAGGGCATCACAGACCTGTTATTGC 39111506 Query 73 CTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCA-ACCATA 131 |||| || | ||||| | |||| | |||||||||||||| || | | | ||| Sbjct 39111507 -TCAATCT-CGTGTGGCTAAACGCCACTTGTCCCTCTAAGAAGTTGGCGCCGACAGCATT 39111564 Query 132 GTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188 ||| || |||||||| ||| || |||||||||||||||||||||||||||||| Sbjct 39111565 TGTGATCGGCGAACTATTTAGTAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACA 39111624 Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248 |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 39111625 AATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTC 39111684 Query 249 TCAATCTGTC 258 |||||||||| Sbjct 39111685 TCAATCTGTC 39111694 >seq10 Length=87592839 Score = 259 bits (286), Expect = 8e-67 Identities = 210/250 (84%), Gaps = 6/250 (2%) Strand=Plus/Minus Query 13 CCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 || |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct 11829621 CCTTCAGTGTAGCGCACGTGCGGCCCCGAACATCTAAGGGCATCACAGACCTGTTATTGC 11829562 Query 73 CTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCA-ACCATA 131 |||| || | ||||| | |||| | |||||||||||||| || | | | ||| Sbjct 11829561 -TCAATCT-CGTGTGGCTAAACGCCACTTGTCCCTCTAAGAAGTTGGCGCCGACAGCATT 11829504 Query 132 GTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188 ||| || |||||||| ||| || |||||||||||||||||||||||||||||| Sbjct 11829503 TGTGATCGGCGAACTATTTAGTAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACA 11829444 Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248 |||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct 11829443 AATCGCTCCACCAACTAAGAACGGCCATGCGCCACCACCCACCGAATCAAGAAAGAGCTC 11829384 Query 249 TCAATCTGTC 258 |||||||||| Sbjct 11829383 TCAATCTGTC 11829374 >seq1428 Length=2703 Score = 84.2 bits (92), Expect = 3e-14 Identities = 77/96 (80%), Gaps = 1/96 (1%) Strand=Plus/Plus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||| | || |||||||||| |||| ||||| |||| | ||||||||||||| ||||| Sbjct 1763 TCTCTATAGTAATCGGAATTAGCCAGGGAAATCGCTCC-CAAACTAAGAACGGCTATGCA 1821 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCT 255 | | ||| ||| |||||||| ||||| | |||||| Sbjct 1822 CAATCACGCATCGAATCAAGTAAGAGTTCCCAATCT 1857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796761103959