Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinctada_20martensii_20[genbank_20GCA_5F002216045.1_202017-07-20] 5,039 sequences; 990,984,031 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq14 82.4 1e-13 seq10 82.4 1e-13 >seq14 Length=46529346 Score = 82.4 bits (90), Expect = 1e-13 Identities = 88/115 (77%), Gaps = 1/115 (1%) Strand=Plus/Minus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGT-CGCCTCCCAAAGAGTAACGGAGGCG 171 ||||||||||| |||| ||||||||||||||||| | || |||| |||||| ||| | Sbjct 11794974 GACAGTGTCAGGCGGGGAGTTTGACTGGGGCGGTACATCTGTCAAACGGTAACGCAGGTG 11794915 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAG 226 || ||| | |||||| ||| ||||||| ||| | ||| || |||||||| Sbjct 11794914 TCCTAAGGTGAGCTCAGCGAGGACGGAAACCTCGCGTAGAGTAAAAGGGCAAAAG 11794860 >seq10 Length=87592839 Score = 82.4 bits (90), Expect = 1e-13 Identities = 88/115 (77%), Gaps = 1/115 (1%) Strand=Plus/Plus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGT-CGCCTCCCAAAGAGTAACGGAGGCG 171 ||||||||||| |||| ||||||||||||||||| | || |||| |||||| ||| | Sbjct 11833617 GACAGTGTCAGGCGGGGAGTTTGACTGGGGCGGTACATCTGTCAAACGGTAACGCAGGTG 11833676 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAG 226 || ||| | |||||| ||| ||||||| ||| | ||| || |||||||| Sbjct 11833677 TCCTAAGGTGAGCTCAGCGAGGACGGAAACCTCGCGTAGAGTAAAAGGGCAAAAG 11833731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982350496864