Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinctada_20martensii_20[genbank_20GCA_5F002216045.1_202017-07-20] 5,039 sequences; 990,984,031 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq10 82.4 5e-14 seq9 82.4 5e-14 >seq10 Length=87592839 Score = 82.4 bits (90), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 ||||| | |||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 11829817 CTCACAATGCCAAC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 11829760 Query 109 TAATACAACGCAAGCT 124 |||| |||||| |||| Sbjct 11829759 TAAT-CAACGCGAGCT 11829745 >seq9 Length=97764462 Score = 82.4 bits (90), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 ||||| | |||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 39111251 CTCACAATGCCAAC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 39111308 Query 109 TAATACAACGCAAGCT 124 |||| |||||| |||| Sbjct 39111309 TAAT-CAACGCGAGCT 39111323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300785790020