Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinctada_20martensii_20[genbank_20GCA_5F002216045.1_202017-07-20] 5,039 sequences; 990,984,031 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq9 84.2 3e-14 seq3 84.2 3e-14 seq10 80.6 3e-13 >seq9 Length=97764462 Score = 84.2 bits (92), Expect = 3e-14 Identities = 85/108 (79%), Gaps = 2/108 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||| ||| |||||||||||| ||||| ||| Sbjct 39112087 AAACCAACAAAATAGAACCG-AGGTCCTCTTCCATTATTCCATGCACCATTATTCAGGCA 39112145 Query 70 TAA-GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGT 116 | ||||||||||| |||||||||||| |||| ||||| || | ||| Sbjct 39112146 AATCGCCTGCTTTGAGCACTCTAATTTTTTCAAAGTAAACGTTCCGGT 39112193 >seq3 Length=91555047 Score = 84.2 bits (92), Expect = 3e-14 Identities = 85/108 (79%), Gaps = 2/108 (2%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||| ||| |||||||||||| ||||| ||| Sbjct 68333322 AAACCAACAAAATAGAACCG-AGGTCCTCTTCCATTATTCCATGCACCATTATTCAGGCA 68333264 Query 70 TAA-GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGT 116 | ||||||||||| |||||||||||| |||| ||||| || | ||| Sbjct 68333263 AATCGCCTGCTTTGAGCACTCTAATTTTTTCAAAGTAAACGTTCCGGT 68333216 >seq10 Length=87592839 Score = 80.6 bits (88), Expect = 3e-13 Identities = 84/108 (78%), Gaps = 2/108 (2%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||| ||| |||||||||||| ||||| ||| Sbjct 11828981 AAACCAACAAAATAGAACCG-AGGTCCTCTTCCATTATTCCATGCACCATTATTCAGGCA 11828923 Query 70 TAA-GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGT 116 | |||||||| || |||||||||||| |||| ||||| || | ||| Sbjct 11828922 AATCGCCTGCTTGGAGCACTCTAATTTTTTCAAAGTAAACGTTCCGGT 11828875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595170945126