Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinctada_20martensii_20[genbank_20GCA_5F002216045.1_202017-07-20] 5,039 sequences; 990,984,031 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq9 127 2e-27 seq3 127 2e-27 seq10 113 5e-23 >seq9 Length=97764462 Score = 127 bits (140), Expect = 2e-27 Identities = 140/184 (76%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 4 ACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACA 62 ||| | || ||||||||||||||||||||| | ||||||||||| ||||| ||||| Sbjct 39112193 ACCGGAACGTTTACTTTGAAAAAATTAGAGTGCTCAAAGCAGGCGATTTGCCTGAATAAT 39112134 Query 63 TTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCC 122 ||||||||||| ||| ||||| | |||||||||||||| ||||| | ||| Sbjct 39112133 GGTGCATGGAATAATGGAAGAGGACCT-CGGTTCTATTTTGTTGGTTTTCGGAACCAGAG 39112075 Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| || | ||| | |||||| | ||||| ||| | ||||||||||||| Sbjct 39112074 GTAATGATTAAGAGGGACTGACGGGGGCATTGGTATTGCGGTGTTAGAGGTGAAATTCTT 39112015 Query 183 GGAT 186 |||| Sbjct 39112014 GGAT 39112011 >seq3 Length=91555047 Score = 127 bits (140), Expect = 2e-27 Identities = 140/184 (76%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 4 ACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACA 62 ||| | || ||||||||||||||||||||| | ||||||||||| ||||| ||||| Sbjct 68333216 ACCGGAACGTTTACTTTGAAAAAATTAGAGTGCTCAAAGCAGGCGATTTGCCTGAATAAT 68333275 Query 63 TTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCC 122 ||||||||||| ||| ||||| | |||||||||||||| ||||| | ||| Sbjct 68333276 GGTGCATGGAATAATGGAAGAGGACCT-CGGTTCTATTTTGTTGGTTTTCGGAACCAGAG 68333334 Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| || | ||| | |||||| | ||||| ||| | ||||||||||||| Sbjct 68333335 GTAATGATTAAGAGGGACTGACGGGGGCATTGGTATTGCGGTGTTAGAGGTGAAATTCTT 68333394 Query 183 GGAT 186 |||| Sbjct 68333395 GGAT 68333398 >seq10 Length=87592839 Score = 113 bits (124), Expect = 5e-23 Identities = 137/184 (74%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 4 ACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-CTTTGCTCGAATACA 62 ||| | || ||||||||||||||||||||| | || |||||||| ||||| ||||| Sbjct 11828875 ACCGGAACGTTTACTTTGAAAAAATTAGAGTGCTCCAAGCAGGCGATTTGCCTGAATAAT 11828934 Query 63 TTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCC 122 ||||||||||| ||| ||||| | |||||||||||||| ||||| | ||| Sbjct 11828935 GGTGCATGGAATAATGGAAGAGGACCT-CGGTTCTATTTTGTTGGTTTTCGGAACCAGAG 11828993 Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| || | ||| | |||||| | ||| | ||| | |||||||||||| Sbjct 11828994 GTAATGATTAAGAGGGACTGACGGGGGCATTGGTACTGCGGTGTTAGAGGTGAAATTCTC 11829053 Query 183 GGAT 186 |||| Sbjct 11829054 GGAT 11829057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511975006560