Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinctada_20martensii_20[genbank_20GCA_5F002216045.1_202017-07-20] 5,039 sequences; 990,984,031 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq10 208 1e-51 seq9 208 1e-51 >seq10 Length=87592839 Score = 208 bits (230), Expect = 1e-51 Identities = 207/264 (78%), Gaps = 3/264 (1%) Strand=Plus/Plus Query 66 CGCCGGCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGG 124 |||| |||||||||||||| | ||| | |||| || | ||||| |||||||||| Sbjct 11829515 CGCCAACTTCTTAGAGGGACAAGTGGCGTTTAGCCACACGA-GATTGAG-CAATAACAGG 11829572 Query 125 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT 184 |||||||||||||||||||||| |||||||||| |||||||||||| | ||||| || Sbjct 11829573 TCTGTGATGCCCTTAGATGTTCGGGGCCGCACGTGCGCTACACTGAAGGCATCAACGTGT 11829632 Query 185 TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 || ||| | ||| ||| ||||||| | | || | | ||||||| ||||| | Sbjct 11829633 CTGTCCCCTGGCCCGAGAGGGTTGGGTAACCCGTTGAACCGCCTTCGTGCTAGGGATTGG 11829692 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 | ||| ||||||| | | | |||||||||| || |||||||||| ||||| ||| |||| Sbjct 11829693 GGCTTGTAATTATTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCG 11829752 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||||| Sbjct 11829753 TTGATTACGTCCCTGCCCTTTGTA 11829776 >seq9 Length=97764462 Score = 208 bits (230), Expect = 1e-51 Identities = 207/264 (78%), Gaps = 3/264 (1%) Strand=Plus/Minus Query 66 CGCCGGCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGG 124 |||| |||||||||||||| | ||| | |||| || | ||||| |||||||||| Sbjct 39111553 CGCCAACTTCTTAGAGGGACAAGTGGCGTTTAGCCACACGA-GATTGAG-CAATAACAGG 39111496 Query 125 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT 184 |||||||||||||||||||||| |||||||||| |||||||||||| | ||||| || Sbjct 39111495 TCTGTGATGCCCTTAGATGTTCGGGGCCGCACGTGCGCTACACTGAAGGCATCAACGTGT 39111436 Query 185 TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 || ||| | ||| ||| ||||||| | | || | | ||||||| ||||| | Sbjct 39111435 CTGTCCCCTGGCCCGAGAGGGTTGGGTAACCCGTTGAACCGCCTTCGTGCTAGGGATTGG 39111376 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 | ||| ||||||| | | | |||||||||| || |||||||||| ||||| ||| |||| Sbjct 39111375 GGCTTGTAATTATTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCG 39111316 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||||| Sbjct 39111315 TTGATTACGTCCCTGCCCTTTGTA 39111292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947152270592