Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinctada_20martensii_20[genbank_20GCA_5F002216045.1_202017-07-20] 5,039 sequences; 990,984,031 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq657 107 3e-21 seq14 98.7 2e-18 seq10 98.7 2e-18 >seq657 Length=4699 Score = 107 bits (118), Expect = 3e-21 Identities = 99/123 (80%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| | | ||||||| | ||| || ||| || |||| Sbjct 1761 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 1704 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||| | ||||||||||| |||||||||||||||||||||||| || | Sbjct 1703 GGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 1644 Query 121 GAA 123 ||| Sbjct 1643 GAA 1641 >seq14 Length=46529346 Score = 98.7 bits (108), Expect = 2e-18 Identities = 91/113 (81%), Gaps = 2/113 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | ||||||| || || |||| || || | Sbjct 11794541 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTTATGTACTTGGCTGATAAGCCAAT 11794484 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 | |||| ||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 11794483 GGTGCGAGGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATC 11794431 >seq10 Length=87592839 Score = 98.7 bits (108), Expect = 2e-18 Identities = 91/113 (81%), Gaps = 2/113 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | ||||||| || || |||| || || | Sbjct 11834050 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTTATGTACTTGGCTGATAAGCCAAT 11834107 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 | |||| ||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 11834108 GGTGCGAGGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATC 11834160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819160010496