Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinctada_20martensii_20[genbank_20GCA_5F002216045.1_202017-07-20] 5,039 sequences; 990,984,031 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq5 109 4e-19 >seq5 Length=54553330 Score = 109 bits (120), Expect = 4e-19 Identities = 134/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 66286 TGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAA 66345 |||||||| || || ||| | || ||| || || | ||||||||| |||||| Sbjct 25738401 TGGACACTCATGGGGGTCCATTAACGTCCATTCTCCGTTACCTTCTACACGCTTCATAAA 25738342 Query 66346 TAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTG 66405 ||||||||| ||||| | ||||||||| |||||||| ||||| |||||||| | || Sbjct 25738341 TAGATCAGGAATCCACATGGCGTAGAACAGATCGCGAGCTCGCTGCTCCTCTTTTCCAGT 25738282 Query 66406 ATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGC 66465 |||||| |||| | ||| | || ||||| | ||||| || || ||||||||||| Sbjct 25738281 ATTTTTCTTGCAGTCCAAGAATTGGAATATGTCTGGGTGCCAGGGCTCTAGGTAGATGGC 25738222 Query 66466 GAA 66468 || Sbjct 25738221 AAA 25738219 Score = 102 bits (112), Expect = 6e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 66037 CTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCC 66096 |||||| ||| | ||||||| ||||| || || ||||||||||| || ||||||||| Sbjct 25738991 CTCGTCTGGACTGCTATACTCTACAATCTCTGTACACAGATTACTACATTTTATGGTGCC 25738932 Query 66097 CAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCC 66156 | ||| |||||||| || || || || |||||||| | |||||| || || || Sbjct 25738931 TAGATTTTGTTGATTGGATTTTCGGTTACAATGGTCCTTGTATAACATGTAAGGTGTACC 25738872 Query 66157 GGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAG 66192 ||||| ||||||||| ||||| || | ||| || Sbjct 25738871 AGTCTCCGTTTGGGACTCGATGATAGCATACCACAG 25738836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397543584230960