Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurobrachia_20bachei_20[genbank_20GCA_5F000695325.1_202014-05-21] 21,979 sequences; 156,121,975 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq19553 86.0 3e-15 seq298 77.0 2e-12 >seq19553 Length=8445 Score = 86.0 bits (94), Expect = 3e-15 Identities = 90/117 (77%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||| ||| |||||||||||| || ||||||| ||| | | || | | | || Sbjct 8073 GAACCCGAAGTCTTTGATTTCTCATAGCGTGCCGAAGGAGCCTAT-TGTGAGCGACCTCC 8015 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||| || |||||| ||||| |||| |||| |||||||||||||||||||||| Sbjct 8014 GATCCGCAGACGGCATCGTTTATGGTTGGAACTAGGACGGTATCTGATCGTCTTCGA 7958 >seq298 Length=76156 Score = 77.0 bits (84), Expect = 2e-12 Identities = 88/117 (75%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||| ||| |||||||||| | || ||||||| ||| | | || | | | || Sbjct 25326 GAACCCGAAGTCTTTGATTTCGCATAGCGTGCCGAAGGAGCCTAT-TGTGAGCGACCTCC 25384 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||| || |||||| ||||| |||| |||| || ||||||||||||||||||| Sbjct 25385 GATCCGCAGACGGCATCGTTTATGGTTGGAACTAGGATGGTATCTGATCGTCTTCGA 25441 Score = 77.0 bits (84), Expect = 2e-12 Identities = 88/117 (75%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||| ||| |||||||||| | || ||||||| ||| | | || | | | || Sbjct 37210 GAACCCGAAGTCTTTGATTTCGCATAGCGTGCCGAAGGAGCCTAT-TGTGAGCGACCTCC 37268 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||| || |||||| ||||| |||| |||| || ||||||||||||||||||| Sbjct 37269 GATCCGCAGACGGCATCGTTTATGGTTGGAACTAGGATGGTATCTGATCGTCTTCGA 37325 Score = 77.0 bits (84), Expect = 2e-12 Identities = 88/117 (75%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||| ||| |||||||||| | || ||||||| ||| | | || | | | || Sbjct 50916 GAACCCGAAGTCTTTGATTTCGCATAGCGTGCCGAAGGAGCCTAT-TGTGAGCGACCTCC 50974 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||| || |||||| ||||| |||| |||| || ||||||||||||||||||| Sbjct 50975 GATCCGCAGACGGCATCGTTTATGGTTGGAACTAGGATGGTATCTGATCGTCTTCGA 51031 Score = 77.0 bits (84), Expect = 2e-12 Identities = 88/117 (75%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||| ||| |||||||||| | || ||||||| ||| | | || | | | || Sbjct 62800 GAACCCGAAGTCTTTGATTTCGCATAGCGTGCCGAAGGAGCCTAT-TGTGAGCGACCTCC 62858 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||| || |||||| ||||| |||| |||| || ||||||||||||||||||| Sbjct 62859 GATCCGCAGACGGCATCGTTTATGGTTGGAACTAGGATGGTATCTGATCGTCTTCGA 62915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278342634810