Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurobrachia_20bachei_20[genbank_20GCA_5F000695325.1_202014-05-21] 21,979 sequences; 156,121,975 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq5466 358 1e-96 seq298 358 1e-96 seq19553 343 2e-92 >seq5466 Length=5474 Score = 358 bits (396), Expect = 1e-96 Identities = 238/262 (91%), Gaps = 7/262 (3%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| ||||| | |||||||| |||||||| ||||||||||||||||||||||||||| Sbjct 1454 TACTCGCTGGCTTCATCAGTGTAACGCGCGTGTGGCCCAGAACATCTAAGGGCATCACAG 1513 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| |||| |||||| ||||||||||||||||| | | Sbjct 1514 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGAAGCCGATAGTCCCTCTAAGAAGTGAAC 1573 Query 121 CAC----CAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGA 176 ||| ||| | || || || |||||||||||||||||||||||||||||| |||| Sbjct 1574 CACGGCTCAA--AGAGCCG-TGTCACTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGA 1630 Query 177 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1631 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 1690 Query 237 AAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||| Sbjct 1691 AAGAAAGAGCTATCAATCTGTC 1712 >seq298 Length=76156 Score = 358 bits (396), Expect = 1e-96 Identities = 238/262 (91%), Gaps = 7/262 (3%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| ||||| | |||||||| |||||||| ||||||||||||||||||||||||||| Sbjct 24940 TACTCGCTGGCTTCATCAGTGTAACGCGCGTGTGGCCCAGAACATCTAAGGGCATCACAG 24999 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| |||| |||||| ||||||||||||||||| | | Sbjct 25000 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGAAGCCGATAGTCCCTCTAAGAAGTGAAC 25059 Query 121 CAC----CAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGA 176 ||| ||| | || || || |||||||||||||||||||||||||||||| |||| Sbjct 25060 CACGGCTCAA--AGAGCCG-TGTCACTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGA 25116 Query 177 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 25117 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 25176 Query 237 AAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||| Sbjct 25177 AAGAAAGAGCTATCAATCTGTC 25198 Score = 358 bits (396), Expect = 1e-96 Identities = 238/262 (91%), Gaps = 7/262 (3%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| ||||| | |||||||| |||||||| ||||||||||||||||||||||||||| Sbjct 36824 TACTCGCTGGCTTCATCAGTGTAACGCGCGTGTGGCCCAGAACATCTAAGGGCATCACAG 36883 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| |||| |||||| ||||||||||||||||| | | Sbjct 36884 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGAAGCCGATAGTCCCTCTAAGAAGTGAAC 36943 Query 121 CAC----CAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGA 176 ||| ||| | || || || |||||||||||||||||||||||||||||| |||| Sbjct 36944 CACGGCTCAA--AGAGCCG-TGTCACTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGA 37000 Query 177 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 37001 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 37060 Query 237 AAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||| Sbjct 37061 AAGAAAGAGCTATCAATCTGTC 37082 Score = 358 bits (396), Expect = 1e-96 Identities = 238/262 (91%), Gaps = 7/262 (3%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| ||||| | |||||||| |||||||| ||||||||||||||||||||||||||| Sbjct 50530 TACTCGCTGGCTTCATCAGTGTAACGCGCGTGTGGCCCAGAACATCTAAGGGCATCACAG 50589 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| |||| |||||| ||||||||||||||||| | | Sbjct 50590 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGAAGCCGATAGTCCCTCTAAGAAGTGAAC 50649 Query 121 CAC----CAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGA 176 ||| ||| | || || || |||||||||||||||||||||||||||||| |||| Sbjct 50650 CACGGCTCAA--AGAGCCG-TGTCACTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGA 50706 Query 177 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 50707 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 50766 Query 237 AAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||| Sbjct 50767 AAGAAAGAGCTATCAATCTGTC 50788 Score = 358 bits (396), Expect = 1e-96 Identities = 238/262 (91%), Gaps = 7/262 (3%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| ||||| | |||||||| |||||||| ||||||||||||||||||||||||||| Sbjct 62414 TACTCGCTGGCTTCATCAGTGTAACGCGCGTGTGGCCCAGAACATCTAAGGGCATCACAG 62473 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| |||| |||||| ||||||||||||||||| | | Sbjct 62474 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGAAGCCGATAGTCCCTCTAAGAAGTGAAC 62533 Query 121 CAC----CAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGA 176 ||| ||| | || || || |||||||||||||||||||||||||||||| |||| Sbjct 62534 CACGGCTCAA--AGAGCCG-TGTCACTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGA 62590 Query 177 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 62591 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 62650 Query 237 AAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||| Sbjct 62651 AAGAAAGAGCTATCAATCTGTC 62672 >seq19553 Length=8445 Score = 343 bits (380), Expect = 2e-92 Identities = 226/247 (91%), Gaps = 7/247 (3%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 8444 TCAGTGTAACGCGCGTGTGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 8385 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCAC----CAACCATA 131 |||||||||| |||| |||||| ||||||||||||||||| | |||| ||| | | Sbjct 8384 AAACTTCCATCGGCTTGAAGCCGATAGTCCCTCTAAGAAGTGAACCACGGCTCAA--AGA 8327 Query 132 GTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAAT 191 | || || |||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 8326 GCCG-TGTCACTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATTAACCAGACAAAT 8268 Query 192 CACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8267 CACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 8208 Query 252 ATCTGTC 258 ||||||| Sbjct 8207 ATCTGTC 8201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796630344099