Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurobrachia_20bachei_20[genbank_20GCA_5F000695325.1_202014-05-21] 21,979 sequences; 156,121,975 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1715 342 9e-92 seq19553 340 3e-91 seq298 340 3e-91 seq7946 232 1e-58 >seq1715 Length=19417 Score = 342 bits (378), Expect = 9e-92 Identities = 247/284 (87%), Gaps = 1/284 (0%) Strand=Plus/Plus Query 12 ATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTA 70 ||||| |||||| | || ||||||||||||||||||||||||||||||| ||||||||| Sbjct 16174 ATTACTATTGGGACAACACGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTA 16233 Query 71 AACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTC 130 |||||||||||||||||||||| | ||||||||||||| |||||| |||||||||||| Sbjct 16234 AACCCAGCTCACGTTCCCTATTGGCGGGTGAACAATCCGACGCTTGGGGAATTCTGCTTC 16293 Query 131 GGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGG 190 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 16294 CCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGG 16353 Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA 250 | ||||||||||||||||||||||||||||||||||| ||| ||||| | ||| | Sbjct 16354 CCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACAACTAGCGTGAAACCCTCA 16413 Query 251 GGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 ||||| ||||||||||||| ||||| ||||||||||| Sbjct 16414 CAAACTAATTGATCGATAGGCCATGCTTTCGCAGTTTGTATTCA 16457 >seq19553 Length=8445 Score = 340 bits (376), Expect = 3e-91 Identities = 253/295 (86%), Gaps = 1/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| || | ||||| |||||| | || | |||||||||||||||||||||||||||| Sbjct 1950 TACTGAGTTGGATTACTATTGGGACAACACTTCATCAGTAGGGTAAAACTAACCTGTCTC 2009 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||| | ||||||||||||| |||||| | Sbjct 2010 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGCGGGTGAACAATCCGACGCTTGGGG 2069 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2070 AATTCTGCTTCCCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 2129 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 2130 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACAACTAGCG 2189 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | ||| | ||||| ||||||||||||| ||||| ||||||||||| Sbjct 2190 TGAAACCCTCACAAACTAATTGATCGATAGGCCATGCTTTCGCAGTTTGTATTCA 2244 >seq298 Length=76156 Score = 340 bits (376), Expect = 3e-91 Identities = 253/295 (86%), Gaps = 1/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| || | ||||| |||||| | || | |||||||||||||||||||||||||||| Sbjct 9041 TACTGAGTTGGATTACTATTGGGACAACACTTCATCAGTAGGGTAAAACTAACCTGTCTC 9100 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||| | ||||||||||||| |||||| | Sbjct 9101 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGCGGGTGAACAATCCGACGCTTGGGG 9160 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 9161 AATTCTGCTTCCCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 9220 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 9221 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACAACTAGCG 9280 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | ||| | ||||| ||||||||||||| ||||| ||||||||||| Sbjct 9281 TGAAACCCTCACAAACTAATTGATCGATAGGCCATGCTTTCGCAGTTTGTATTCA 9335 Score = 340 bits (376), Expect = 3e-91 Identities = 253/295 (86%), Gaps = 1/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| || | ||||| |||||| | || | |||||||||||||||||||||||||||| Sbjct 11663 TACTGAGTTGGATTACTATTGGGACAACACTTCATCAGTAGGGTAAAACTAACCTGTCTC 11722 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||| | ||||||||||||| |||||| | Sbjct 11723 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGCGGGTGAACAATCCGACGCTTGGGG 11782 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 11783 AATTCTGCTTCCCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 11842 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 11843 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACAACTAGCG 11902 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | ||| | ||||| ||||||||||||| ||||| ||||||||||| Sbjct 11903 TGAAACCCTCACAAACTAATTGATCGATAGGCCATGCTTTCGCAGTTTGTATTCA 11957 Score = 340 bits (376), Expect = 3e-91 Identities = 253/295 (86%), Gaps = 1/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| || | ||||| |||||| | || | |||||||||||||||||||||||||||| Sbjct 74709 TACTGAGTTGGATTACTATTGGGACAACACTTCATCAGTAGGGTAAAACTAACCTGTCTC 74768 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||| | ||||||||||||| |||||| | Sbjct 74769 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGCGGGTGAACAATCCGACGCTTGGGG 74828 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 74829 AATTCTGCTTCCCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 74888 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 74889 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACAACTAGCG 74948 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | ||| | ||||| ||||||||||||| ||||| ||||||||||| Sbjct 74949 TGAAACCCTCACAAACTAATTGATCGATAGGCCATGCTTTCGCAGTTTGTATTCA 75003 Score = 334 bits (370), Expect = 1e-89 Identities = 252/295 (85%), Gaps = 1/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| || | ||||| |||||| | || | |||||||||||||||||||||||||||| Sbjct 2303 TACTGAGTTGGATTACTATTGGGACAACACTTCATCAGTAGGGTAAAACTAACCTGTCTC 2362 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||| | ||||||||||||| |||||| | Sbjct 2363 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGCGGGTGAACAATCCGACGCTTGGGG 2422 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2423 AATTCTGCTTCCCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 2482 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 2483 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACAACTAGCG 2542 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | ||| | ||||| ||||||| ||||| ||||| ||||||||||| Sbjct 2543 TGAAACCCTCACAAACTAATTGATCGATCGGCCATGCTTTCGCAGTTTGTATTCA 2597 >seq7946 Length=2865 Score = 232 bits (256), Expect = 1e-58 Identities = 155/173 (90%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 56 TCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTT 115 ||||| ||||||||||||||||||||||||||||||| | |||||||||| || |||||| Sbjct 1 TCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGCGGGTGAACAAACCGACGCTT 60 Query 116 ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTC 175 ||| |||||||| |||||||||||| ||||||||||||||||||||| | ||||| Sbjct 61 GGGGAAATCTGCTTCACAATGATAGGAAGAACCGACATCGAAGGATCAAAAAACGACGTC 120 Query 176 GCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGG 228 |||||||||||||||| ||||||||||||||||||||||||||| || ||||| Sbjct 121 GCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAAATTATCTGG 173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854212211424