Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurobrachia_20bachei_20[genbank_20GCA_5F000695325.1_202014-05-21] 21,979 sequences; 156,121,975 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq5466 93.3 3e-17 seq298 75.2 7e-12 >seq5466 Length=5474 Score = 93.3 bits (102), Expect = 3e-17 Identities = 70/79 (89%), Gaps = 4/79 (5%) Strand=Plus/Plus Query 34 CCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTA 93 ||||| |||| | ||||||||| ||||| || ||||||||| ||||||||||| ||||| Sbjct 1257 CCAATCCCGAGA--TCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTA 1312 Query 94 CAAAGGGCAGGGACGTAAT 112 ||||||||||||||||||| Sbjct 1313 CAAAGGGCAGGGACGTAAT 1331 >seq298 Length=76156 Score = 75.2 bits (82), Expect = 7e-12 Identities = 60/69 (87%), Gaps = 4/69 (6%) Strand=Plus/Plus Query 34 CCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTA 93 ||||| |||| | ||||||||| ||||| || ||||||||| ||||||||||| ||||| Sbjct 24734 CCAATCCCGAGA--TCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTA 24789 Query 94 CAAAGGGCA 102 ||||||||| Sbjct 24790 CAAAGGGCA 24798 Score = 75.2 bits (82), Expect = 7e-12 Identities = 60/69 (87%), Gaps = 4/69 (6%) Strand=Plus/Plus Query 34 CCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTA 93 ||||| |||| | ||||||||| ||||| || ||||||||| ||||||||||| ||||| Sbjct 36618 CCAATCCCGAGA--TCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTA 36673 Query 94 CAAAGGGCA 102 ||||||||| Sbjct 36674 CAAAGGGCA 36682 Score = 75.2 bits (82), Expect = 7e-12 Identities = 60/69 (87%), Gaps = 4/69 (6%) Strand=Plus/Plus Query 34 CCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTA 93 ||||| |||| | ||||||||| ||||| || ||||||||| ||||||||||| ||||| Sbjct 50324 CCAATCCCGAGA--TCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTA 50379 Query 94 CAAAGGGCA 102 ||||||||| Sbjct 50380 CAAAGGGCA 50388 Score = 75.2 bits (82), Expect = 7e-12 Identities = 60/69 (87%), Gaps = 4/69 (6%) Strand=Plus/Plus Query 34 CCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTA 93 ||||| |||| | ||||||||| ||||| || ||||||||| ||||||||||| ||||| Sbjct 62208 CCAATCCCGAGA--TCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTA 62263 Query 94 CAAAGGGCA 102 ||||||||| Sbjct 62264 CAAAGGGCA 62272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300738019220