Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurobrachia_20bachei_20[genbank_20GCA_5F000695325.1_202014-05-21] 21,979 sequences; 156,121,975 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq5466 342 1e-91 seq298 340 3e-91 seq19553 179 7e-43 >seq5466 Length=5474 Score = 342 bits (378), Expect = 1e-91 Identities = 264/311 (85%), Gaps = 2/311 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCC-CGCTTTGGCGGGTCGCCGGCTTCTTA 78 || ||||||||||||||||||||||| | | | ||||| || | ||||||| Sbjct 1621 GAACGAGACCTTAACCTGCTAAATAGTGACACGGCTCTTTGAGCCGTGGTTCACTTCTTA 1562 Query 79 GAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1561 GAGGGACTATCGGCTTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 1502 Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGC 197 ||||||||||||||| |||||||| |||||||| ||||| ||||| ||| |||| | Sbjct 1501 TAGATGTTCTGGGCCACACGCGCGTTACACTGATGAAGCCAGCGAGTATATCGCCTTCAC 1442 Query 198 CGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 257 |||||||| |||||||||||| ||||| |||||||||||||||| |||||||||| | Sbjct 1441 CGGAAGGTGCGGGTAATCTTGTGAAACTTCATCGTGCTGGGGATAGACCATTGCAATTTT 1382 Query 258 TGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCC 317 || |||| |||||||||| |||||||||| | ||||||| | || | |||||||||||| Sbjct 1381 TGGTCTTGAACGAGGAATTCCTAGTAAGCATGAGTCATCAACTCGTGCTGATTACGTCCC 1322 Query 318 TGCCCTTTGTA 328 ||||||||||| Sbjct 1321 TGCCCTTTGTA 1311 >seq298 Length=76156 Score = 340 bits (376), Expect = 3e-91 Identities = 263/310 (85%), Gaps = 2/310 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCC-CGCTTTGGCGGGTCGCCGGCTTCTTA 78 || ||||||||||||||||||||||| | | | ||||| || | ||||||| Sbjct 25107 GAACGAGACCTTAACCTGCTAAATAGTGACACGGCTCTTTGAGCCGTGGTTCACTTCTTA 25048 Query 79 GAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 25047 GAGGGACTATCGGCTTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 24988 Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGC 197 ||||||||||||||| |||||||| |||||||| ||||| ||||| ||| |||| | Sbjct 24987 TAGATGTTCTGGGCCACACGCGCGTTACACTGATGAAGCCAGCGAGTATATCGCCTTCAC 24928 Query 198 CGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 257 |||||||| |||||||||||| ||||| |||||||||||||||| |||||||||| | Sbjct 24927 CGGAAGGTGCGGGTAATCTTGTGAAACTTCATCGTGCTGGGGATAGACCATTGCAATTTT 24868 Query 258 TGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCC 317 || |||| |||||||||| |||||||||| | ||||||| | || | |||||||||||| Sbjct 24867 TGGTCTTGAACGAGGAATTCCTAGTAAGCATGAGTCATCAACTCGTGCTGATTACGTCCC 24808 Query 318 TGCCCTTTGT 327 |||||||||| Sbjct 24807 TGCCCTTTGT 24798 Score = 340 bits (376), Expect = 3e-91 Identities = 263/310 (85%), Gaps = 2/310 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCC-CGCTTTGGCGGGTCGCCGGCTTCTTA 78 || ||||||||||||||||||||||| | | | ||||| || | ||||||| Sbjct 36991 GAACGAGACCTTAACCTGCTAAATAGTGACACGGCTCTTTGAGCCGTGGTTCACTTCTTA 36932 Query 79 GAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 36931 GAGGGACTATCGGCTTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 36872 Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGC 197 ||||||||||||||| |||||||| |||||||| ||||| ||||| ||| |||| | Sbjct 36871 TAGATGTTCTGGGCCACACGCGCGTTACACTGATGAAGCCAGCGAGTATATCGCCTTCAC 36812 Query 198 CGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 257 |||||||| |||||||||||| ||||| |||||||||||||||| |||||||||| | Sbjct 36811 CGGAAGGTGCGGGTAATCTTGTGAAACTTCATCGTGCTGGGGATAGACCATTGCAATTTT 36752 Query 258 TGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCC 317 || |||| |||||||||| |||||||||| | ||||||| | || | |||||||||||| Sbjct 36751 TGGTCTTGAACGAGGAATTCCTAGTAAGCATGAGTCATCAACTCGTGCTGATTACGTCCC 36692 Query 318 TGCCCTTTGT 327 |||||||||| Sbjct 36691 TGCCCTTTGT 36682 Score = 340 bits (376), Expect = 3e-91 Identities = 263/310 (85%), Gaps = 2/310 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCC-CGCTTTGGCGGGTCGCCGGCTTCTTA 78 || ||||||||||||||||||||||| | | | ||||| || | ||||||| Sbjct 50697 GAACGAGACCTTAACCTGCTAAATAGTGACACGGCTCTTTGAGCCGTGGTTCACTTCTTA 50638 Query 79 GAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 50637 GAGGGACTATCGGCTTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 50578 Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGC 197 ||||||||||||||| |||||||| |||||||| ||||| ||||| ||| |||| | Sbjct 50577 TAGATGTTCTGGGCCACACGCGCGTTACACTGATGAAGCCAGCGAGTATATCGCCTTCAC 50518 Query 198 CGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 257 |||||||| |||||||||||| ||||| |||||||||||||||| |||||||||| | Sbjct 50517 CGGAAGGTGCGGGTAATCTTGTGAAACTTCATCGTGCTGGGGATAGACCATTGCAATTTT 50458 Query 258 TGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCC 317 || |||| |||||||||| |||||||||| | ||||||| | || | |||||||||||| Sbjct 50457 TGGTCTTGAACGAGGAATTCCTAGTAAGCATGAGTCATCAACTCGTGCTGATTACGTCCC 50398 Query 318 TGCCCTTTGT 327 |||||||||| Sbjct 50397 TGCCCTTTGT 50388 Score = 340 bits (376), Expect = 3e-91 Identities = 263/310 (85%), Gaps = 2/310 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCC-CGCTTTGGCGGGTCGCCGGCTTCTTA 78 || ||||||||||||||||||||||| | | | ||||| || | ||||||| Sbjct 62581 GAACGAGACCTTAACCTGCTAAATAGTGACACGGCTCTTTGAGCCGTGGTTCACTTCTTA 62522 Query 79 GAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 62521 GAGGGACTATCGGCTTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 62462 Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGC 197 ||||||||||||||| |||||||| |||||||| ||||| ||||| ||| |||| | Sbjct 62461 TAGATGTTCTGGGCCACACGCGCGTTACACTGATGAAGCCAGCGAGTATATCGCCTTCAC 62402 Query 198 CGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 257 |||||||| |||||||||||| ||||| |||||||||||||||| |||||||||| | Sbjct 62401 CGGAAGGTGCGGGTAATCTTGTGAAACTTCATCGTGCTGGGGATAGACCATTGCAATTTT 62342 Query 258 TGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCC 317 || |||| |||||||||| |||||||||| | ||||||| | || | |||||||||||| Sbjct 62341 TGGTCTTGAACGAGGAATTCCTAGTAAGCATGAGTCATCAACTCGTGCTGATTACGTCCC 62282 Query 318 TGCCCTTTGT 327 |||||||||| Sbjct 62281 TGCCCTTTGT 62272 >seq19553 Length=8445 Score = 179 bits (198), Expect = 7e-43 Identities = 133/153 (87%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCC-CGCTTTGGCGGGTCGCCGGCTTCTTA 78 || ||||||||||||||||||||||| | | | ||||| || | ||||||| Sbjct 8292 GAACGAGACCTTAACCTGCTAAATAGTGACACGGCTCTTTGAGCCGTGGTTCACTTCTTA 8351 Query 79 GAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 8352 GAGGGACTATCGGCTTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 8411 Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 ||||||||||||||| |||||||| |||||||| Sbjct 8412 TAGATGTTCTGGGCCACACGCGCGTTACACTGA 8444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946991814912