Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurobrachia_20bachei_20[genbank_20GCA_5F000695325.1_202014-05-21] 21,979 sequences; 156,121,975 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq298 639 0.0 >seq298 Length=76156 Score = 639 bits (708), Expect = 0.0 Identities = 451/508 (89%), Gaps = 7/508 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||| | | || | || | | ||| || | | |||||||||||||||||| Sbjct 25918 GTACTCATTCCGACTGCAGAAGCCGTAGGCGCC-TGCAACGTTATTTATTGTCACTACCT 25976 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 25977 CCCCGAATCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 26036 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 26037 TCTCGGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTTACCCGTTGTCACCATGGTA 26096 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| || | ||||||||||||||||||||||||||| | ||||||| ||||||||||| Sbjct 26097 AGCCAATACCTTACCATCGAAAGTTGATAGGGCAGAAACTCGAATGAAACATCGCCGGCT 26156 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCG--AAGGGCGTTG 298 | ||||||||||||||| |||||||||||||||||||| ||| || || || ||| Sbjct 26157 CGAGGCCATGCGATTCGAACAGTTATTATGAATCACCAAGAAGCGTCGTAAAACGCATTG 26216 Query 299 GTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTC 357 | ||| |||||||||||||| ||||||| ||||||||| |||| |||||||||||||| Sbjct 26217 G-CTTTAATCTAATAAATACATCCCTTCCAGAAGTCGGGACTTTTCGCATGTATTAGCTC 26275 Query 358 TAGAATTACCACGGTTATCCATGTAGTAA-GGTACTATCAAATAAACGATAACTGATTTA 416 ||||||||| ||||||||||||||||||| || || |||||||| ||||||||||||||| Sbjct 26276 TAGAATTACTACGGTTATCCATGTAGTAAGGGCACAATCAAATAGACGATAACTGATTTA 26335 Query 417 ATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATC 476 ||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||| Sbjct 26336 ATGAGCCATTCGCAGTTTCACCGTATA-AAAGCTTATACTTAGACATGCATGGCTTAATC 26394 Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| Sbjct 26395 TTTGAGACAAGCATATGACTACTGGCAG 26422 Score = 639 bits (708), Expect = 0.0 Identities = 451/508 (89%), Gaps = 7/508 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||| | | || | || | | ||| || | | |||||||||||||||||| Sbjct 37802 GTACTCATTCCGACTGCAGAAGCCGTAGGCGCC-TGCAACGTTATTTATTGTCACTACCT 37860 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 37861 CCCCGAATCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 37920 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 37921 TCTCGGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTTACCCGTTGTCACCATGGTA 37980 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| || | ||||||||||||||||||||||||||| | ||||||| ||||||||||| Sbjct 37981 AGCCAATACCTTACCATCGAAAGTTGATAGGGCAGAAACTCGAATGAAACATCGCCGGCT 38040 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCG--AAGGGCGTTG 298 | ||||||||||||||| |||||||||||||||||||| ||| || || || ||| Sbjct 38041 CGAGGCCATGCGATTCGAACAGTTATTATGAATCACCAAGAAGCGTCGTAAAACGCATTG 38100 Query 299 GTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTC 357 | ||| |||||||||||||| ||||||| ||||||||| |||| |||||||||||||| Sbjct 38101 G-CTTTAATCTAATAAATACATCCCTTCCAGAAGTCGGGACTTTTCGCATGTATTAGCTC 38159 Query 358 TAGAATTACCACGGTTATCCATGTAGTAA-GGTACTATCAAATAAACGATAACTGATTTA 416 ||||||||| ||||||||||||||||||| || || |||||||| ||||||||||||||| Sbjct 38160 TAGAATTACTACGGTTATCCATGTAGTAAGGGCACAATCAAATAGACGATAACTGATTTA 38219 Query 417 ATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATC 476 ||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||| Sbjct 38220 ATGAGCCATTCGCAGTTTCACCGTATA-AAAGCTTATACTTAGACATGCATGGCTTAATC 38278 Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| Sbjct 38279 TTTGAGACAAGCATATGACTACTGGCAG 38306 Score = 639 bits (708), Expect = 0.0 Identities = 451/508 (89%), Gaps = 7/508 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||| | | || | || | | ||| || | | |||||||||||||||||| Sbjct 51508 GTACTCATTCCGACTGCAGAAGCCGTAGGCGCC-TGCAACGTTATTTATTGTCACTACCT 51566 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 51567 CCCCGAATCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 51626 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 51627 TCTCGGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTTACCCGTTGTCACCATGGTA 51686 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| || | ||||||||||||||||||||||||||| | ||||||| ||||||||||| Sbjct 51687 AGCCAATACCTTACCATCGAAAGTTGATAGGGCAGAAACTCGAATGAAACATCGCCGGCT 51746 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCG--AAGGGCGTTG 298 | ||||||||||||||| |||||||||||||||||||| ||| || || || ||| Sbjct 51747 CGAGGCCATGCGATTCGAACAGTTATTATGAATCACCAAGAAGCGTCGTAAAACGCATTG 51806 Query 299 GTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTC 357 | ||| |||||||||||||| ||||||| ||||||||| |||| |||||||||||||| Sbjct 51807 G-CTTTAATCTAATAAATACATCCCTTCCAGAAGTCGGGACTTTTCGCATGTATTAGCTC 51865 Query 358 TAGAATTACCACGGTTATCCATGTAGTAA-GGTACTATCAAATAAACGATAACTGATTTA 416 ||||||||| ||||||||||||||||||| || || |||||||| ||||||||||||||| Sbjct 51866 TAGAATTACTACGGTTATCCATGTAGTAAGGGCACAATCAAATAGACGATAACTGATTTA 51925 Query 417 ATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATC 476 ||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||| Sbjct 51926 ATGAGCCATTCGCAGTTTCACCGTATA-AAAGCTTATACTTAGACATGCATGGCTTAATC 51984 Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| Sbjct 51985 TTTGAGACAAGCATATGACTACTGGCAG 52012 Score = 639 bits (708), Expect = 0.0 Identities = 451/508 (89%), Gaps = 7/508 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||| | | || | || | | ||| || | | |||||||||||||||||| Sbjct 63392 GTACTCATTCCGACTGCAGAAGCCGTAGGCGCC-TGCAACGTTATTTATTGTCACTACCT 63450 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 63451 CCCCGAATCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 63510 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 63511 TCTCGGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTTACCCGTTGTCACCATGGTA 63570 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| || | ||||||||||||||||||||||||||| | ||||||| ||||||||||| Sbjct 63571 AGCCAATACCTTACCATCGAAAGTTGATAGGGCAGAAACTCGAATGAAACATCGCCGGCT 63630 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCG--AAGGGCGTTG 298 | ||||||||||||||| |||||||||||||||||||| ||| || || || ||| Sbjct 63631 CGAGGCCATGCGATTCGAACAGTTATTATGAATCACCAAGAAGCGTCGTAAAACGCATTG 63690 Query 299 GTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTC 357 | ||| |||||||||||||| ||||||| ||||||||| |||| |||||||||||||| Sbjct 63691 G-CTTTAATCTAATAAATACATCCCTTCCAGAAGTCGGGACTTTTCGCATGTATTAGCTC 63749 Query 358 TAGAATTACCACGGTTATCCATGTAGTAA-GGTACTATCAAATAAACGATAACTGATTTA 416 ||||||||| ||||||||||||||||||| || || |||||||| ||||||||||||||| Sbjct 63750 TAGAATTACTACGGTTATCCATGTAGTAAGGGCACAATCAAATAGACGATAACTGATTTA 63809 Query 417 ATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATC 476 ||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||| Sbjct 63810 ATGAGCCATTCGCAGTTTCACCGTATA-AAAGCTTATACTTAGACATGCATGGCTTAATC 63868 Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| Sbjct 63869 TTTGAGACAAGCATATGACTACTGGCAG 63896 Score = 639 bits (708), Expect = 0.0 Identities = 451/508 (89%), Gaps = 7/508 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||| | | || | || | | ||| || | | |||||||||||||||||| Sbjct 69587 GTACTCATTCCGACTGCAGAAGCCGTAGGCGCC-TGCAACGTTATTTATTGTCACTACCT 69645 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 69646 CCCCGAATCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 69705 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 69706 TCTCGGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTTACCCGTTGTCACCATGGTA 69765 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| || | ||||||||||||||||||||||||||| | ||||||| ||||||||||| Sbjct 69766 AGCCAATACCTTACCATCGAAAGTTGATAGGGCAGAAACTCGAATGAAACATCGCCGGCT 69825 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCG--AAGGGCGTTG 298 | ||||||||||||||| |||||||||||||||||||| ||| || || || ||| Sbjct 69826 CGAGGCCATGCGATTCGAACAGTTATTATGAATCACCAAGAAGCGTCGTAAAACGCATTG 69885 Query 299 GTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTC 357 | ||| |||||||||||||| ||||||| ||||||||| |||| |||||||||||||| Sbjct 69886 G-CTTTAATCTAATAAATACATCCCTTCCAGAAGTCGGGACTTTTCGCATGTATTAGCTC 69944 Query 358 TAGAATTACCACGGTTATCCATGTAGTAA-GGTACTATCAAATAAACGATAACTGATTTA 416 ||||||||| ||||||||||||||||||| || || |||||||| ||||||||||||||| Sbjct 69945 TAGAATTACTACGGTTATCCATGTAGTAAGGGCACAATCAAATAGACGATAACTGATTTA 70004 Query 417 ATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATC 476 ||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||| Sbjct 70005 ATGAGCCATTCGCAGTTTCACCGTATA-AAAGCTTATACTTAGACATGCATGGCTTAATC 70063 Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| Sbjct 70064 TTTGAGACAAGCATATGACTACTGGCAG 70091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510068029184