Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq12411 152 1e-34 seq20762 127 4e-27 >seq12411 Length=1650 Score = 152 bits (168), Expect = 1e-34 Identities = 231/327 (71%), Gaps = 9/327 (3%) Strand=Plus/Minus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGT---GAT 67 ||||| |||||||||| |||||| |||| | ||||||| || |||||| || || Sbjct 1480 AGGGGAGTGAAATAGAACCTGAAACCGCATACGTACAAGCAGTGGGAGCCTGGTTACGAC 1421 Query 68 TCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTA 127 |||||| |||| ||||||| |||||| | | ||| ||| | | | ||| |||||| Sbjct 1420 CGGGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTAATTTT-AGTAGCAAGGTTA 1362 Query 128 AGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGG 187 | | || || ||||| || |||| |||| ||||| |||||| ||||| | | Sbjct 1361 ACCGATTAGGGG-----AGCCGTAGGGAAACCGAGTCTTAATAGGGCGTTTAGTTGCTAG 1307 Query 188 CGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGA 247 ||||| ||||||| | |||||||||| | |||||||||| ||||| Sbjct 1306 GATTAGACCCGAAACCGAGCGATCTACCCATGGCCAGGTTGAAGGTTGAGTAACATCAAC 1247 Query 248 TGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAA 307 |||||||||||||| | |||||||| | |||||| | |||| || |||||| Sbjct 1246 TGGAGGACCGAACCCACGTATGTTGAAAAATGCGGGGATGAGCTGTGGGTCGGAGTGAAA 1187 Query 308 GGCCAATCAAACTGGGAAATAGCTCGT 334 ||| |||||| || ||| |||||| || Sbjct 1186 GGCTAATCAAGCTCGGAGATAGCTGGT 1160 >seq20762 Length=540 Score = 127 bits (140), Expect = 4e-27 Identities = 193/269 (72%), Gaps = 7/269 (3%) Strand=Plus/Plus Query 67 TTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTT 126 ||| ||||| |||| ||||||| |||||| | | ||| ||| ||| ||| || || Sbjct 9 TTCCGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTACAT-TCAGTAGCAAGCTT 67 Query 127 AAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG-AGTTGGT 185 || | | ||| | ||| | || ||||||||| ||||| ||||||| ||||| | Sbjct 68 AACCGGAT-AGG---GGAAGC-GTAGCGAAAGCGAGTCTTAATAGGGCGATTTAGTTGCT 122 Query 186 GGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGT 245 || ||||| ||||||| |||||||| || | |||| ||||| |||||| | | Sbjct 123 GGGTGTAGACCCGAAACCAGATGATCTACTCATGGCCAGGATGAAGCGAAGGTAACACTT 182 Query 246 GATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGA 305 |||||| ||||||| || |||||||| || |||||| | |||||||||||| Sbjct 183 TGTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGA 242 Query 306 AAGGCCAATCAAACTGGGAAATAGCTCGT 334 ||||| || |||| |||||||||| || Sbjct 243 AAGGCTAAACAAATCTGGAAATAGCTGGT 271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972220337664