Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq33107 217 3e-54 seq5262 82.4 2e-13 >seq33107 Length=353 Score = 217 bits (240), Expect = 3e-54 Identities = 239/312 (77%), Gaps = 11/312 (4%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||| ||| ||| ||||| |||||| ||||||| |||||||||||||||||||||| Sbjct 45 CACGCGGCGTTG-CTGCATCAGACTTTCGTCCATTGTGCAATATTCCCCACTGCTGCCTC 103 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| | ||||||||||||||||| | | Sbjct 104 CCGTAGGAGTCTGGTCCGTGTCTCAGTACCAGTGTGGCGGATCATCCTCTCAGACCCGCT 163 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGACCTAGGCTCAT 208 | | || | | ||||||||||||||||||||||||||| || || | || ||| | || Sbjct 164 ATGTGTCATAGGCTTGGTGAGCCATTACCTCACCAACTACCTGATACAACATAGACCGAT 223 Query 209 CTGATAGCGCAAGGC---CCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATT 265 | ||||| || | || || ||| || | | |||| |||| ||||| Sbjct 224 CCCTTAGCGAAAAACTTTCCCAA-CTCC----ATTAAGGCAGAAGGA-GTATCTAGTATT 277 Query 266 AGCGTCCGTTTCCGAACGTTATCCCCCACTACCAGGCA-GATTCCTAGGCATTACTCACC 324 | |||||||| | |||||| |||| |||| | | |||| |||||||||||| Sbjct 278 ATTCACCGTTTCCAGTGGCTATCCCAGACTAAGGGGCACGTTACCTATGCATTACTCACC 337 Query 325 CGTCCGCCGCTC 336 ||| |||| ||| Sbjct 338 CGTGCGCCACTC 349 >seq5262 Length=8103 Score = 82.4 bits (90), Expect = 2e-13 Identities = 98/126 (78%), Gaps = 8/126 (6%) Strand=Plus/Plus Query 55 TCGCCCATTGTCCAAT-ATTCCCCACTGCTGCCTCCCG--TAGGAGTCTGGACCGTGTCT 111 || || |||||||||| ||||| ||||||||||| ||| ||||||||||| |||||||| Sbjct 4823 TCTCCGATTGTCCAATTATTCCTCACTGCTGCCTTCCGCGTAGGAGTCTGGTCCGTGTCT 4882 Query 112 C-AGT-TCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAG 169 | ||| ||||||| | |||| |||||||| | ||| ||||| ||| ||| | | Sbjct 4883 CAAGTATCCAGTGGG--GGATCCCCCTCTCAGGCGCCCTACCCATCGTAGCCATGGAG-G 4939 Query 170 CCATTA 175 || ||| Sbjct 4940 CCGTTA 4945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071361227360