Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= AAMG01001188.1 Length=621 Score E Sequences producing significant alignments: (Bits) Value seq30190 199 1e-48 seq57896 107 7e-21 seq44316 93.3 2e-16 seq15188 75.2 4e-11 >seq30190 Length=383 Score = 199 bits (220), Expect = 1e-48 Identities = 274/378 (72%), Gaps = 5/378 (1%) Strand=Plus/Minus Query 28 CTTGCTTTGGCTTTTCGAGGCGTTCGCCGAGAAACGGCTTGACGAAGGATTTGCAGCTCG 87 ||||||| | |||| || || || || || ||||| || ||||| ||| | ||| Sbjct 376 CTTGCTTCGCCTTT--GACGCATTAGCTGAAAAACGACTA-ACGAATTCTTTTAAT-TCG 321 Query 88 GTGATCTGCGCCTTCTTTCTTGGCGTTGTCCGACAGCAGTTGCTCGCGGGACTGGGTCGC 147 | || | || ||||| |||||| || || |||| || | || || | || || || Sbjct 320 GAAATTTTAGCTTTCTT-CTTGGCATTATCAGACAACAACCGTTCACGCGCTTGCGTTGC 262 Query 148 CACGGTCATGTACTCGTCGTAGTTGCCCGGGAACAGGCGCAGCTCGCCGTAGTCCAGGTC 207 | || ||| ||||| |||||||| || || | | ||||| ||| ||||| |||| || Sbjct 261 CGCGAACATATACTCATCGTAGTTACCAGGATAAACGCGCAACTCACCGTAATCCAAATC 202 Query 208 AGCCATGTGGGTACACACGCTGTTCAGGAAGTGACGGTCGTGAGAGATGATGATCATCAG 267 ||||||||| |||||||||||||| | |||||||||||| || |||||||||| |||| Sbjct 201 AGCCATGTGCGTACACACGCTGTTTAAGAAGTGACGGTCATGCGAGATGATGACCATCGT 142 Query 268 GCTGGAACGCTGGGTCAGGATATTTTCCAGCCAGCGGATGGTGTTGATGTCCAAGTGGTT 327 || ||||| | | ||| ||||||| ||| || ||||| || || ||||||| || Sbjct 141 ACTTTTACGCTCATTGATGATGTTTTCCAACCATCGAATGGTATTAATATCCAAGTTATT 82 Query 328 GGTCGGTTCGTCGAGCAACAGCACTTCAGGATCGGAAAACAGCGCCTGGGCCAGCAATAC 387 ||| || || |||||||| | | ||||| | || |||||| ||||| || || | || Sbjct 81 GGTTGGCTCATCGAGCAATAAAATATCAGGGTTGGCAAACAGAGCCTGTGCGAGTAGCAC 22 Query 388 ACGCAGCTTCCAGCCCGG 405 || | ||||| ||||| Sbjct 21 CCGTAATTTCCAACCCGG 4 >seq57896 Length=207 Score = 107 bits (118), Expect = 7e-21 Identities = 135/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 332 GGTTCGTCGAGCAACAGCACTTCAGGATCGGAAAACAGCGCCTGGGCCAGCAATACACGC 391 || || || |||| || | || || || ||||||| || || ||||||||||| ||| Sbjct 207 GGCTCATCAAGCAGCATTATATCTGGCTCAGAAAACAATGCTTGTGCCAGCAATACGCGC 148 Query 392 AGCTTCCAGCCCGGGGACACTTCGCTCATCGGACCGAAGTGCTGCTCCAGCGGA-ATACC 450 |||||||| || || | ||||| ||||| || ||| | || || | ||| || || | Sbjct 147 AGCTTCCAACCAGGTGCAACTTCACTCATTGGGCCGTAATGTTG-TTCAGATGATATCTC 89 Query 451 CAGACCCAGCAGCAGCTCACCGGCACGGGATTCGGCGGTGTAGCCGTCCATCTCGGCGAA 510 || || | ||||| ||| || ||||| | ||| |||| ||| |||||||| || ||||| Sbjct 88 TAGGCCTAACAGCAACTCGCCAGCACGTGCTTCAGCGGAGTAACCGTCCATTTCAGCGAA 29 Query 511 CTC 513 ||| Sbjct 28 CTC 26 >seq44316 Length=273 Score = 93.3 bits (102), Expect = 2e-16 Identities = 180/255 (71%), Gaps = 8/255 (3%) Strand=Plus/Minus Query 11 TTGGCACGGGAAGTGGCCTTGCTTTGGCTTTTCGAGGCGTTCGCCGAGAAACGGCTTGAC 70 || ||||| || || || ||| ||| | |||| || || || || ||||||||||| || Sbjct 270 TTAGCACGTGATGTTGC-TTG-TTTAGATTTT-GAAGCATTTGCAGAGAAACGGCTA-AC 215 Query 71 GAAGGATTTGCAGCTCGGTGATCTGCGCCTTCTTTCTTGGCGTTGTCCGACAGCAGTTGC 130 |||||||| ||||| | || ||| || | |||||| || || || || ||| | Sbjct 214 AAAGGATTTA-AGCTCTGCAATTTGCACCCT-TTTCTTTGCATTTTCTGATTGCAAACGT 157 Query 131 TCGCGGGACTGG-GTCGCCACGGTCATGTACTCGTCGTAGTTGCCCGGGAACAGGCGCAG 189 || | ||| | || | | |||||| ||||| ||||| || || | || || | Sbjct 156 TCA-GTCACTTGTGTTGAAGCAACCATGTAGTCGTCATAGTTACCATGGTAAAGACGAAC 98 Query 190 CTCGCCGTAGTCCAGGTCAGCCATGTGGGTACACACGCTGTTCAGGAAGTGACGGTCGTG 249 || || || || | || ||||| || ||||| || ||||| | |||||||||||| || Sbjct 97 TTCACCATAATCTAAATCGGCCATATGTGTACAAACACTGTTTAAGAAGTGACGGTCATG 38 Query 250 AGAGATGATGATCAT 264 |||||||| ||||| Sbjct 37 CGAGATGATAATCAT 23 >seq15188 Length=833 Score = 75.2 bits (82), Expect = 4e-11 Identities = 142/207 (69%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 193 GCCGTAGTCCAGGTCAGCCATGTGGGTACACACGCTGTTCAGGAAGTGACGGTCGTGAGA 252 |||| | || | || || || |||||||| | ||||| |||||| |||||||| || Sbjct 400 GCCGAAATCGATATCGGCGATATGGGTACAGGCCTGGTTCAAGAAGTGCCGGTCGTGGGA 459 Query 253 GATGATGATCATC--AGGCTGGAACGCTGGGTCAGGATATTTTCCAGCCAGCGGATGGTG 310 | | ||||| | ||| || ||| || | | ||| ||||| | || | Sbjct 460 AACCACGATCAGGGTATTCTGAAAAC--GGGCGAGAAAGTCTTCGAGCCATTGAATCGAC 517 Query 311 TTGATGTCCAAGTGGTTGGTCGGTTCGTCGAGCAACAGCACTTCAGGATCGGAAAACAGC 370 |||| |||| |||||||||||| || || |||| |||||| || |||| |||||| Sbjct 518 TTGAGATCCAGGTGGTTGGTCGGCTCATCCAGCAGCAGCACATCGGGATTACCGAACAGC 577 Query 371 GCCTGGGCCAGCAATACACGCAGCTTC 397 ||||| |||| || || || | |||| Sbjct 578 GCCTGAGCCAACAGCACGCGGACCTTC 604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1880443773852