Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq12411 327 4e-87 seq20762 239 2e-60 >seq12411 Length=1650 Score = 327 bits (362), Expect = 4e-87 Identities = 360/469 (77%), Gaps = 14/469 (3%) Strand=Plus/Plus Query 133 CGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTT 192 ||| ||| |||||||| |||||| ||||||||||||||| | || |||||| ||||| Sbjct 1129 CGAGGCTCTACCTAAATAGATTTCGAGGAGAACCAGCTATCTCCGAGCTTGATTAGCCTT 1188 Query 193 TCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACG 252 |||| || | |||||| |||||||| || |||||||| || ||||||||||||||||| Sbjct 1189 TCACTCCGACCCACAGCTCATCCCCGCATTTTTCAACATACGTGGGTTCGGTCCTCCAGT 1248 Query 253 CGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCG 312 | | |||| | |||||||||| |||||| |||||| || | |||||||| | ||| Sbjct 1249 TGATGTTACTCAACCTTCAACCTGGCCATGGGTAGATCGCTCGGTTTCGGGTC-TAATCC 1307 Query 313 T-GCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAAC 371 | || ||| | |||||||||| |||||| |||| |||||||| |||| | ||||||| Sbjct 1308 TAGCAACT-AAACGCCCTATTAAGACTCGGTTTCCCTACGGCT-CCCCTAATCGGTTAAC 1365 Query 372 CTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTAC 431 || || || || || |||| | | |||| | ||||||| |||| |||||| ||| | Sbjct 1366 CTTGCTAC-TAAAATTAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCGGT-C 1423 Query 432 CTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTC 491 ||| || ||||| || | ||||| | | |||||||||| ||||||||||| Sbjct 1424 GTAA---CCA----GGCTCCCACTGCTTGTACGTATGCGGTTTCAGGTTCTATTTCACTC 1476 Query 492 CCCGC-CAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAG 550 ||| | | ||||| |||||| |||||||||||||||||| || | |||||||||| || Sbjct 1477 CCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCAGTTAG 1536 Query 551 GAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 ||||||||| ||| || ||||||| ||| ||||| || || ||||| Sbjct 1537 TAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCA 1585 Score = 120 bits (132), Expect = 1e-24 Identities = 138/177 (78%), Gaps = 8/177 (5%) Strand=Plus/Plus Query 45 CACTTCCCGGCATTCGGAGTTTGGT-TGATTTCGGTAAGCTTGTG-GGCCCCCTAGACCA 102 ||||| | || |||||||||||| || ||| ||||||| | |||||||||| ||| Sbjct 957 CACTTGCTGGTATTCGGAGTTTGCAATGGTTT-GGTAAGCCGGGATGGCCCCCTAG-CCA 1014 Query 103 TC-CAGTGCTCTACCTCCGGGAA-GAAACACGCGACGCTGCACCTAAATGCATTTCGGGG 160 | |||||||||||| || | | || ||||| | |||| |||||||| ||||| || Sbjct 1015 TAACAGTGCTCTACCCCCAGCAGTGATACACGAGGCGCT--ACCTAAATAGCTTTCGAGG 1072 Query 161 AGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCC 217 ||||||||||||| | | |||||| ||||||||| || |||||||| |||||||| Sbjct 1073 AGAACCAGCTATCTCCGGGCTTGATTAGCCTTTCACTCCGATCCACAGCTCATCCCC 1129 >seq20762 Length=540 Score = 239 bits (264), Expect = 2e-60 Identities = 293/391 (75%), Gaps = 7/391 (2%) Strand=Plus/Minus Query 36 CCGCGCTCTCACTTCCCGGCATTCGGAGTTTGGT-TGATTTCGGTAAGCTTGTGGGCCCC 94 || ||||| |||| | || |||||||||||| || ||| |||||| | | ||| Sbjct 398 CCACGCTCGCACTCTCTGGTATTCGGAGTTTGCAATGGTTT-GGTAAGTCTAAATGACCC 340 Query 95 CTAGACCATC-CAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCAT 153 |||| |||| |||||||||||| || | | | | ||| || || |||||||| | Sbjct 339 CTAG-CCATGACAGTGCTCTACCCCCAG-AGGTGATACGTGAGGCACTACCTAAATAGTT 282 Query 154 TTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCAT 213 ||||| ||||||||||||| | | |||| || |||||||||||||| |||||| |||| Sbjct 281 TTCGGAGAGAACCAGCTATTTCCAGATTTGTTTAGCCTTTCACCCCTACCCACAGCTCAT 222 Query 214 CCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAAC 273 ||||| | |||||||| | ||||||||||| ||||||| || ||||| ||||||| | Sbjct 221 CCCCTAATTTTTCAACATTAGTGGGTTCGGACCTCCACAAAGTGTTACCTTCGCTTCATC 162 Query 274 CTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTC 333 ||| ||||| ||||||| | | ||||||||| | | || ||| | ||||||||| Sbjct 161 CTGGCCATGAGTAGATCATCTGGTTTCGGGTCTACACCCAGCAACTAAATCGCCCTATTA 102 Query 334 GGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCG 393 |||||||||||||||| ||| |||| | |||||| || || || || | || ||| Sbjct 101 AGACTCGCTTTCGCTAC-GCTTCCCCTATCCGGTTAAGCTTGCTACTGAATG-TAAGTCG 44 Query 394 CAGGCTCATTCTTCAAAAGGCACGCCGTCAC 424 | | | |||| | ||||||| |||| ||||| Sbjct 43 CTGACCCATTATACAAAAGGTACGCAGTCAC 13 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1816516946688