Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq12411 484 2e-134 seq20762 201 3e-49 seq15548 98.7 2e-18 >seq12411 Length=1650 Score = 484 bits (536), Expect = 2e-134 Identities = 368/424 (87%), Gaps = 19/424 (4%) Strand=Plus/Plus Query 3 TCCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTA 62 ||||| |||||| |||| || | ||||||||| || ||||||||||||||||| Sbjct 1193 TCCGACCCACAGCTCATCCCCGCA--TTTTTCAACATACGTGGGTTCGGTCCTCCAGTTG 1250 Query 63 GTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTT 122 | ||||| ||||||| ||||||| |||| || |||||||| |||||| |||||||| | Sbjct 1251 AT-GTTACTCAACCTT-CAACCTGGCCATGGG-TAGATCGCTCGGTTT-CGGGTCTAAT- 1305 Query 123 CCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAA 182 || ||| |||| |||||||| ||||||||| ||| | ||||| |||||||| |||||||| Sbjct 1306 CCTAGCAACTAAACGCCCTATTAAGACTCGGTTTCC-CTACGGCTCCCCTAATCGGTTAA 1364 Query 183 GCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCC---- 238 ||| || ||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1365 CCTT-GCTACTAAAATTAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCGGTC 1423 Query 239 --AACAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCC 296 ||| | ||||||||||||||||||| || |||||||||| ||||||||||||||| Sbjct 1424 GTAACCA----GGCTCCCACTGCTTGTACGTATGCGGTTTCAGGTTCTATTTCACTCCCC 1479 Query 297 TCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAG 356 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct 1480 TCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCAGTTAGTAG 1539 Query 357 TATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTA 416 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1540 TATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCACGTGCTCCGTCCTA 1599 Query 417 CTCG 420 |||| Sbjct 1600 CTCG 1603 >seq20762 Length=540 Score = 201 bits (222), Expect = 3e-49 Identities = 194/236 (82%), Gaps = 10/236 (4%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 |||||| |||| || |||| ||||||||| |||| ||||||| |||||| ||| ||| Sbjct 232 CCACAGCTCATCCC-CTAA-TTTTTCAACATTAGTGGGTTCGGACCTCCACAAAGT-GTT 176 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| ||| || |||| |||| | |||||| | ||||| |||||||| |||||| Sbjct 175 ACCTTCGCTT-CATCCTGGCCATGAG-TAGATCATCTGGTTT-CGGGTCTACA-CCCAGC 120 Query 129 GACTAGA-CGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTT 187 |||| | ||||||| ||||||||||||| |||||||| |||||||| ||||||||||| Sbjct 119 AACTAAATCGCCCTATTAAGACTCGCTTT-CGCTACGCTTCCCCTATCCGGTTAAGCTT- 62 Query 188 GCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAA 243 || |||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 61 GCTACTGAATGTAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACGGAACAA 6 >seq15548 Length=797 Score = 98.7 bits (108), Expect = 2e-18 Identities = 60/64 (94%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 357 TATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTA 416 ||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| Sbjct 1 TATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAACGTTTCACGTGCGTCGTCCTA 60 Query 417 CTCG 420 |||| Sbjct 61 CTCG 64 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1240860167808